Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi511g00002 ATGGATGATGAATCTGGTCCAAGAAATTTCAGGAAAAGATCATGGAACAACTACCATGAAGATCAACAACATGTCAACTATCAAGCTGGCGAAGAATCCAATAGCACATGGTTGAAGCAAGCACATCAAAACGAGGTTCCATTATCTTCGAGAGCAGGTTTGTTCCAGTCACTTATGTATGAAGCTGTTGGAAGGACTATAAATCCGGTGAATGGAGCAGTGGGGCTTTTGTGGACTGGGAGGTGGCGGTTTTGTCAACTGGGTGTCGAGCAAGTTTTGAGAGGTAACGGTGGCGCGTTGACACCACTGCCGGATCATGAGAGTAGTGAAAAGGGAAGTAGTTCTAGACATCATCAAAATCACCAACAAAAACTAATGATTGAAGAAAACAAGACACAGTCCGAGGAATCGGAGTCGTTGACGTTGGGAAGTAGAACAGGAACTGAGAATTATTCATATGTTTATGCTAATTCTCAAACTCAAACTAATCAACTTCTTAAACTGTTCTTATGA 513 0.4191 MDDESGPRNFRKRSWNNYHEDQQHVNYQAGEESNSTWLKQAHQNEVPLSSRAGLFQSLMYEAVGRTINPVNGAVGLLWTGRWRFCQLGVEQVLRGNGGALTPLPDHESSEKGSSSRHHQNHQQKLMIEENKTQSEESESLTLGSRTGTENYSYVYANSQTQTNQLLKLFL 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi511g00002 170 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 44 141 - -
Vivi511g00002 170 MobiDBLite consensus disorder prediction 98 143 - -
Vivi511g00002 170 MobiDBLite consensus disorder prediction 109 135 - -
Vivi511g00002 170 Pfam Lateral organ boundaries (LOB) domain 44 90 IPR004883 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi511g00002 46 105 AS2 family AT5G67420 65.000 2.14e-22 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Vivi511g00002 LOB 7.9e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi511g00002 - - vvo:131610942 228.794