Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi507g00011 ATGGCATCCGATTCCACCAACACCAACACGCTCCTTGCCATTTGCTACGACCGCGGTTCTCTTCAGCTTCTCGATCAGAGGAAGCTTCCTTTAGAAAGTGTTTACTTGGAAATTCGGGATTCAAACGATGGCTGGAATGCTATACGAGATATGGTGGTCCGAGGAGCACCTGCTATTGCTATTGCCGCGGCTCTTTCTCTGGCTGTGGAGGTATCCAATTTAGATGATTTCAATGGATCTACTGATGACGCTGTATACTTCCTGCAGAAGAAGTTGGACTATCTTGTCTCAAGTCGGCCAACCGCGGTTAACTTATCGGATGCTGCGACAAAGCTCAAAGAAATCACATTGAAGGCTGCTGCTACAACTTCAGAGGCTAAGGGTGTTTTTCAGGCTTATGTAGAAGCTTCTGAAATAATGCTTGAGGACGATGTTGCGTCGAACAAAGCAATTGGGACTTATGGAGCTAAATTTATTCAAAACCATACAGAGAAACAAAAGCTTTCTGTTTTGACCCATTGCAACACTGGAAGTTTAGCCACAGCTGGATATGGTACTGCTCTTGGTGTTATCCGTGCACTTAACAGTGGAGGAGTTTTAGAAAGGGCTTATTGTACGGAAACACGCCCATTCAATCAAGGTTCCAGACTTACTGCCTATGAGTTGGTACATGAAAAAATACCAGCAACTCTCATAGCAGATTCTGCTGCAGCTGCACTAATGCAAGCAGGACGTGTGGATGCTGTTGTTGTTGGCGCAGATCGTGTTGCCTCTAATGGTGACACAGCGAACAAAATCGGAACTTATAGTGTTGCCTTATGTGCCAAGTTTCATAATGTACCTTTTTATGTTGCTGCACCCTTGACTTCCATTGATCTATCACTTTCTTCCGGGCAACAAATTGTCATTGAGGAGAGATCTCCCAAGGAGTTGTTAAATTCACGCGGAGGACTCGGAGAGCAAGTTGCTGCCTCAGGAATATCAGTGTGGAATCCGGCATTTGATGTTACACCTGCTCATCTAATTTCTGGGATCATCACTGAGAAGGGTGTCATTACAAAGACTACCGCTGGTGATGCTTTTGACATAAACGCTTTCGTACAGAAAACAGGTTAA 1116 0.4471 MASDSTNTNTLLAICYDRGSLQLLDQRKLPLESVYLEIRDSNDGWNAIRDMVVRGAPAIAIAAALSLAVEVSNLDDFNGSTDDAVYFLQKKLDYLVSSRPTAVNLSDAATKLKEITLKAAATTSEAKGVFQAYVEASEIMLEDDVASNKAIGTYGAKFIQNHTEKQKLSVLTHCNTGSLATAGYGTALGVIRALNSGGVLERAYCTETRPFNQGSRLTAYELVHEKIPATLIADSAAAALMQAGRVDAVVVGADRVASNGDTANKIGTYSVALCAKFHNVPFYVAAPLTSIDLSLSSGQQIVIEERSPKELLNSRGGLGEQVAASGISVWNPAFDVTPAHLISGIITEKGVITKTTAGDAFDINAFVQKTG 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi507g00011 371 Gene3D - 201 365 IPR042529 -
Vivi507g00011 371 FunFam Methylthioribose-1-phosphate isomerase 9 200 - -
Vivi507g00011 371 Hamap Putative methylthioribose-1-phosphate isomerase [mtnA]. 11 363 IPR005251 -
Vivi507g00011 371 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 7 368 - -
Vivi507g00011 371 Pfam Initiation factor 2 subunit family 53 353 IPR000649 GO:0044237
Vivi507g00011 371 NCBIfam S-methyl-5-thioribose-1-phosphate isomerase 39 354 IPR011559 GO:0044249
Vivi507g00011 371 NCBIfam S-methyl-5-thioribose-1-phosphate isomerase 13 354 IPR005251 -
Vivi507g00011 371 Gene3D - 9 200 IPR027363 -
Vivi507g00011 371 FunFam Methylthioribose-1-phosphate isomerase 166 364 - -
Vivi507g00011 371 SUPERFAMILY NagB/RpiA/CoA transferase-like 7 355 IPR037171 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi507g00011 50 369 Eukaryotic Initiation Factors Gene Family AT2G05830 76.636 2.43e-170 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi507g00011 K08963 - gmx:100799311 573.933