Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi500g00047 ATGATCTCAGCATTCAAATGTGTCCATGATGAATTAAGCAGTCAACAGGAATACTTGAAGCTGAAGGCACGTTATGAGTCTCTACAACGCTTTCAGAGGAACCTAATGGGAGAAGATCTTGGCCCTCTAAGCAGCAAAGATCTTGAAACTCTTGAAAGGCAGCTAGATTCTTCCTTGAAGCAAATCAGATCCACAAGGACCCAATTCATGCTGGATCAGCTGGGAGATCTTCAACGTAAGGAACACTTGCTATGTGAGGCTAACAGAGCTCTTAGACAAAGGATGGAAGGGTATCAAATAAATTCACTCCAACTGAATATGAGTGGTGAAGATATGGGATATGGACATCATCATCATCATCAAATAAATTCTTGGTGTCATCTCTACTCAAAGACTTCCTTTCTCATCAAACTCATTTGA 420 0.4071 MISAFKCVHDELSSQQEYLKLKARYESLQRFQRNLMGEDLGPLSSKDLETLERQLDSSLKQIRSTRTQFMLDQLGDLQRKEHLLCEANRALRQRMEGYQINSLQLNMSGEDMGYGHHHHHQINSWCHLYSKTSFLIKLI 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi500g00047 139 Pfam K-box region 11 95 IPR002487 GO:0003700|GO:0005634|GO:0006355
Vivi500g00047 139 Coils Coil 48 68 - -
Vivi500g00047 139 ProSiteProfiles K-box domain profile. 11 101 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi500g00047 13 91 MADS-box Gene Family AT3G02310 73.418 3.30e-34 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi500g00047 - - gmx:100805078 179.104