Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi500g00027 ATGGGAAAAGCTACAAGATGGTTGAAGGGTTTGTTTGGAATGAAGAAGGAGAAAGAACACAGTAACAAATCAGGTCCATTGTTTCTAGACAAGGAGAAAAAACACATTAACAAATCAGGTCAATTGTTTCTAGATAGGAAGGAGAAGAAACAATCATGTAAGGATCATCAAAATCACATTAGTCAAACAAGTGTTCAAGGTTTTGATAGTGCTAGGTACAGTGTTGCTGAAAAACAGAATGAGTACAATAAAAAAGCAATTTTTTCAAGGTCATTAAGCCATGGCAGTAGTAGAGGATCATTGTTTTTTGGTAGCAGGGAGTGGAGGGCTGCTGTCAAGATTCAATCATTTTTCAGAGGCTTTTTGGCGCGAAAAGCTCTTCGAGCACTAAGAGGATTGGTTAAGATACAAGCTCTTGTTAGAGGCTTCCTTGTTAGGAAAAGAGTTGTTGCAACACTTCACAGTATTCAAGCTCTGATGAGAGCTCAAGCAGTTGTTCGTTCACGACGAGCGCGTAGATCCTTTGATAAGGAGAATGCGCGTCCGAAACATATCCATAGACGAAAACATTTGCAAATGTTTGATGAAACTCGAAATGTACAACATGATCATAAATGGCTGCACAATTCTGGCTCAAGTAGATTTGATCCAAACCGGGTAATCCTCGCGATTGATCCTCACAGGTCTAGTTCAAGATCTTCAATGTCCGAATATAGAGACGATATGCATCAACACTACTACGAAACAACATCATCCTCCCTTCCAAGTCACCTTTCGCGTAGGATTTCACTTCACGAATGCCAACATTCTCAAGATTTTGATTCGTGCTTCAATAATGTTAATGACGAGCATAAATTCTTTACGGCTCATAGCACTCCTCGGTTATCAAACTCTTCCCAAGCTAATACTCCTTTGGCGAAGAGCGTTTCTGAAGAGACCAGCATGTTCTTGCCTTACTCTAACTGTCCTAACTACATGGCTAATACTCATTCATCTAAGGCGAGAGTGGTAAGGTCTCGCAGCGCCCCGAAGCAAAGATCTGATGTCAAGAAAAGGGTTCCACTTGAGGAAATAATGGCCACAAGAAATAGCTTAAGTTCTGTAAGAATGCATTGGTAA 1119 0.4057 MGKATRWLKGLFGMKKEKEHSNKSGPLFLDKEKKHINKSGQLFLDRKEKKQSCKDHQNHISQTSVQGFDSARYSVAEKQNEYNKKAIFSRSLSHGSSRGSLFFGSREWRAAVKIQSFFRGFLARKALRALRGLVKIQALVRGFLVRKRVVATLHSIQALMRAQAVVRSRRARRSFDKENARPKHIHRRKHLQMFDETRNVQHDHKWLHNSGSSRFDPNRVILAIDPHRSSSRSSMSEYRDDMHQHYYETTSSSLPSHLSRRISLHECQHSQDFDSCFNNVNDEHKFFTAHSTPRLSNSSQANTPLAKSVSEETSMFLPYSNCPNYMANTHSSKARVVRSRSAPKQRSDVKKRVPLEEIMATRNSLSSVRMHW 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi500g00027 372 Gene3D - 42 132 - -
Vivi500g00027 372 Gene3D - 133 182 - -
Vivi500g00027 372 Pfam Protein of unknown function (DUF4005) 294 366 IPR025064 -
Vivi500g00027 372 ProSiteProfiles IQ motif profile. 157 184 IPR000048 GO:0005515
Vivi500g00027 372 PANTHER IQ-DOMAIN 5-RELATED 1 357 - -
Vivi500g00027 372 Pfam IQ calmodulin-binding motif 109 128 IPR000048 GO:0005515
Vivi500g00027 372 Pfam IQ calmodulin-binding motif 134 148 IPR000048 GO:0005515
Vivi500g00027 372 ProSiteProfiles IQ motif profile. 131 158 IPR000048 GO:0005515
Vivi500g00027 372 ProSiteProfiles IQ motif profile. 109 135 IPR000048 GO:0005515
Vivi500g00027 372 SMART iq_5 106 128 IPR000048 GO:0005515
Vivi500g00027 372 SMART iq_5 129 150 IPR000048 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi500g00027 1 370 IQD Protein Family AT3G16490 37.468 2.09e-50 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi500g00027 - - psat:127083621 532.332