Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi500g00007 ATGGCAGGACACTTGCTACTTTTGGCGTTTCTAACTTCTTTGATTTTTCCTTTCATCGTTCATGCTCAGAACAACCAATCAGGATTCATTAGCATTGACTGTGGACTAGTGGATGAACCAAGCTACACAGATGAAACTACTTCCATCTATTACACTAGGGATGTTAATTTCACAGATACTGGTGTAAGCCGCAGCATATCGTCTAAACACAAGGCTTCCCTTGAAAGACAGTTCTGGAATGTTAGAAGCTTCCCAGAAGGAACCAGGAACTGCTACACCCTTTTTGTTTCACAAGGAAGTAGCAAGAAATACTTAGTCAGAGCCAGTTTTGTGTATGGTAATTATGATGGAAAAGACTCTCTTCCTGAATTCGATGTTTACCTTGGAGCCAAACGGTGGGAATCTGTGGTGTTTGAGGATTCATCGAGTGTAATAACTAAGGAAATAATTTATGCTGCTTCCTCAGATTATGTTCATGTTTGTTTGTTCAATATTGGAAAGGGTACACCTTTTATTTCAGTTTTAGAGGTTAGAGTTCTTAACAGTGATGCTTATCTTGTTAACTCTTTGGAACTTTTGGCAAGGTTTAATGTAGGCTCAAAGGGTGGTCCAAAAATCAGATATCCAGATGATATTTATGACAGAATATGGACACCATATAACTCAAAAGACTGGAAAAAGATAGATACTTCACTCACCATAGACCAAGGAGCACCTTTTTTCAATTTCTTACCGCTACCATCCTCCGCTGTCATGCGAACAACATTAATTCCAGAAAAAGACAGTGACAATATAGAGTTTCACTTCCTTCCCAAGTATAATGCCTCCAGATATTACGTGTATTTGTACTTTGCTGAAATCCAGAAACTCGAGCCAAATCAAATTAGAGAGTTCAACATTTTTGTAAACGGGAAGCTTTTAAATATAGTCAACCCTTTGTACCTGCAGAGCCTGTATTATGTATCAGTTATAAGTGAAAATAAGTTGGAACTTTGGTTCAATAAGACTAGTAGATCAACTCTTCCACCACTCTTTAGTGCGATCGAGGTATACATGACAAAGGACTTATTACAATCAGAAACATATCAAACAGACGTTGATGCTATCCAAAATGTGAAGTCAATTTATGGGATCAAGAGAAACTGGCAGGGAGATCCTTGTACTCCTATGTCATATTTGTGGGATGGTCTAAACTGCAGCTATGTTGGATCTGATTCACCAAAGATCATATACTTGAACTTAACTTCTAGCGGTTTATTTGGAACTATAGCTCCTAGCATATCCAATCTAAAGTCAATAGAATATTTGGATTTGTCAAATAACAGCTTGACTGGGGCAGTGCCTGATTTCCTATCTCAGCTGCGCTTTTTGAAAGTTTTAAACCTGGAAGGAAATAAGCTATCAGGAGCAATTCCAAAAGAACTTCTTGTGCATCCTAAGAATAGTGTGCTCAAATTCAATTTTGGTGGAAATCCAAATCTTTGCTCCTCAGGTTCATGCAACAAGGGGAATCGAAATAAGGTTGTGGTTCCATTAGTAGCTTCACTTGGAGGAGCTGTCGTGGTACTAGCAGTAGCAATGATTTCTTTTCGCATATACTACAAGAGACACCAAGCTTCCCATCAGCTGAGCAAGGTTGGTGCTTATTCAAGAATAAAGCAGGAACTAGAATCAAAGAAACAAGAATTCACCTATGAAGAAGTATTAAGCATTACCAGAAACTTTGAAAAGGTTGTGGGAAAAGGAGCATCTGGAACAGTCTACCATGGCTGGATTGATGATGATACTGAGGTAGCTGTCAAAATGCTATCTTCCTCATCAGCTCAAGGATCTCTGCAATTTCAAGCAGAGGCCAAACTTTTTGCTATAGTTCATCATAAATACTTGACGGGTCTTATAGGGTATTGTGACGATGGCACCAACATGGCTCTAATCTATGAGTATATGGCTAATGGAGATTTAACCAACCACTTGTCAGATAAAAACGAAAATATATTAAGTTGGAATCAGAGACTTCAAATTGCAGTAGATGCTGCAGAAGGATTGGAGTATTTGCATCATGGCTGTAATCCACCAATTGTTCACAGAGATGTTAAATCCAAAAACATCTTACTAAATGAAAAACTCCAGGGAAAATTAGCTGATTTTGGGTTGTCAAAGATATTTCCTAATGAAGGTGACACTCATGTCTTCACGGTTGTTGCTGGCACACCAGGATACCTTGATCCAGATTGA 2235 0.3852 MAGHLLLLAFLTSLIFPFIVHAQNNQSGFISIDCGLVDEPSYTDETTSIYYTRDVNFTDTGVSRSISSKHKASLERQFWNVRSFPEGTRNCYTLFVSQGSSKKYLVRASFVYGNYDGKDSLPEFDVYLGAKRWESVVFEDSSSVITKEIIYAASSDYVHVCLFNIGKGTPFISVLEVRVLNSDAYLVNSLELLARFNVGSKGGPKIRYPDDIYDRIWTPYNSKDWKKIDTSLTIDQGAPFFNFLPLPSSAVMRTTLIPEKDSDNIEFHFLPKYNASRYYVYLYFAEIQKLEPNQIREFNIFVNGKLLNIVNPLYLQSLYYVSVISENKLELWFNKTSRSTLPPLFSAIEVYMTKDLLQSETYQTDVDAIQNVKSIYGIKRNWQGDPCTPMSYLWDGLNCSYVGSDSPKIIYLNLTSSGLFGTIAPSISNLKSIEYLDLSNNSLTGAVPDFLSQLRFLKVLNLEGNKLSGAIPKELLVHPKNSVLKFNFGGNPNLCSSGSCNKGNRNKVVVPLVASLGGAVVVLAVAMISFRIYYKRHQASHQLSKVGAYSRIKQELESKKQEFTYEEVLSITRNFEKVVGKGASGTVYHGWIDDDTEVAVKMLSSSSAQGSLQFQAEAKLFAIVHHKYLTGLIGYCDDGTNMALIYEYMANGDLTNHLSDKNENILSWNQRLQIAVDAAEGLEYLHHGCNPPIVHRDVKSKNILLNEKLQGKLADFGLSKIFPNEGDTHVFTVVAGTPGYLDPD 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi500g00007 744 Gene3D Ribonuclease Inhibitor 366 486 IPR032675 -
Vivi500g00007 744 SMART serkin_6 573 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi500g00007 744 ProSitePatterns Serine/Threonine protein kinases active-site signature. 693 705 IPR008271 GO:0004672|GO:0006468
Vivi500g00007 744 SUPERFAMILY Protein kinase-like (PK-like) 558 744 IPR011009 -
Vivi500g00007 744 Gene3D - 189 354 - -
Vivi500g00007 744 Pfam Malectin-like domain 32 352 IPR024788 -
Vivi500g00007 744 ProSitePatterns Protein kinases ATP-binding region signature. 579 601 IPR017441 GO:0005524
Vivi500g00007 744 Pfam Protein tyrosine and serine/threonine kinase 575 724 IPR001245 GO:0004672|GO:0006468
Vivi500g00007 744 FunFam Leucine-rich repeat receptor-like kinase 364 497 - -
Vivi500g00007 744 PANTHER OS07G0107800 PROTEIN-RELATED 30 744 - -
Vivi500g00007 744 Gene3D Transferase(Phosphotransferase) domain 1 649 744 - -
Vivi500g00007 744 SUPERFAMILY L domain-like 365 479 - -
Vivi500g00007 744 Gene3D Phosphorylase Kinase; domain 1 554 648 - -
Vivi500g00007 744 Pfam Leucine rich repeat 411 467 IPR001611 GO:0005515
Vivi500g00007 744 ProSiteProfiles Protein kinase domain profile. 573 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi500g00007 15 744 Receptor kinase-like Gene Family AT2G19210 48.922 0.0 694
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Vivi500g00007 Malectin_like 3.9e-97 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi500g00007 - - psat:127087401 1318.52