Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi500g00006 ATGGCAGGACACTTGCTACTTTTGGCGTTTCTAACTTCTTTGATTTTTCCTTTCATCGTTCATGCTCAGAACAACCAATCAGGATTCATTAGCATTGACTGTGGACTAGTGGATGAACCAAGCTACACAGATGAAACTACTTCCATCTATTACACTAGGGATGTTAATTTCACAGATACTGGTGTAAGCCGCAGCATATCGTCTAAACACAAGGCTTCCCTTGAAAGACAGTTCTGGAATGTTAGAAGCTTCCCAGAAGGAACCAGGAACTGCTACACCCTTTTTGTTTCACAAGGAAGTAGCAAGAAATACTTAGTCAGAGCCAGTTTTGTGTATGGTAATTATGATGGAAAAGACTCTCTTCCTGAATTCGATGTTTACCTTGGAGCCAAACGGTGGGAATCTGTGGTGTTTGAGGATTCATCGAGTGTAATAACTAAGGAAATAATTTATGCTGCTTCCTCAGATTATGTTCATGTTTGTTTGTTCAATATTGGAAAGGGTACACCTTTTATTTCAGTTTTAGAGGTTAGAGTTCTTAACAGTGATGCTTATCTTGTTAACTCTTTGGAACTTTTGGCAAGGTTTAATGTAGGCTCAAAGGGTGGTCCAAAAATCAGATATCCAGATGATATTTATGACAGAATATGGACACCATATAACTCAAAAGACTGGAAAAAGATAGATACTTCACTCACCATAGACCAAGGAGCACCTTTTTTCAATTTCTTACCGCTACCATCCTCCGCTGTCATGCGAACAACATTAATTCCAGAAAAAGACAGTGACAATATAGAGTTTCACTTCCTTCCCAAGTATAATGCCTCCAGATATTACGTGTATTTGTACTTTGCTGAAATCCAGAAACTCGAGCCAAATCAAATTAGAGAGTTCAACATTTTTGTAAACGGGAAGCTTTTAAATATAGTCAACCCTTTGTACCTGCAGAGCCTGTATTATGTATCAGTTATAAGTGAAAATAAGTTGGAACTTTGGTTCAATAAGACTAGTAGATCAACTCTTCCACCACTCTTTAGTGCGATCGAGGTATACATGACAAAGGACTTATTACAATCAGAAACATATCAAACAGACGTTGATGCTATCCAAAATGTGAAGTCAATTTATGGGATCAAGAGAAACTGGCAGGGAGATCCTTGTACTCCTATGTCATATTTGTGGGATGGTCTAAACTGCAGCTATGTTGGATCTGATTCACCAAAGATCATATACTTGAACTTAACTTCTAGCGGTTTATTTGGAACTATAGCTCCTAGCATATCCAATCTAAAGTCAATAGAATATTTGGATTTGTCAAATAACAGCTTGACTGGGGCAGTGCCTGATTTCCTATCTCAGCTGCGCTTTTTGAAAGTTTTAAACCTGGAAGGAAATAAGCTATCAGGAGCAATTCCAAAAGAACTTCTTGTGCATCCTAAGAATAGTGTGCTCAAATTCAATTTTGGTGGAAATCCAAATCTTTGCTCCTCAGGTTCATGCAACAAGGGGAATCGAAATAAGGTTGTGGTTCCATTAGTAGCTTCACTTGGAGGAGCTGTCGTGGTACTAGCAGTAGCAATGATTTCTTTTCGCATATACTACAAGAGACACCAAGCTTCCCATCAGCTGAGCAAGGTTGGTGCTTATTCAAGAATAAAGCAGGAACTAGAATCAAAGAAACAAGAATTCACCTATGAAGAAGTATTAAGCATTACCAGAAACTTTGAAAAGGTTGTGGGAAAAGGAGCATCTGGAACAGTCTACCATGGCTGGATTGATGATGATACTGAGGTAGCTGTCAAAATGCTATCTTCCTCATCAGCTCAAGGATCTCTGCAATTTCAAGCAGAGGCCAAACTTTTTGCTATAGTTCATCATAAATACTTGACGGGTCTTATAGGGTATTGTGACGATGGCACCAACATGGCTCTAATCTATGAGTATATGGCTAATGGAGATTTAACCAACCACTTGTCAGATAAAAACGAAAATATATTAAGTTGGAATCAGAGACTTCAAATTGCAGTAGATGCTGCAGAAGGATTGGAGTATTTGCATCATGGCTGTAATCCACCAATTGTTCACAGAGATGTTAAATCCAAAAACATCTTACTAAATGAAAAACTCCAGGGAAAATTAGCTGATTTTGGGTTGTCAAAGATATTTCCTAATGAAGGTGACACTCATGTCTTCACGGTTGTTGCTGGCACACCAGGATACCTTGATCCAGAGTACAATAGACTAAGCAAGCTAAGAGAAAAAAGTGATGTTTTCAGTTTCGGGGTAGTTTTGCTTGAGATAATAACAGGACAACCTGCCATAACCAAAACTGAAGAAAAAATCCATATTATTCAGTGGGTTAGTTCCACGCTGGTGGAAAGAGAGGTAAAGGATATTGTAGATCCGAGATTACAAGGAGAATTTGATATTTCCTCTGCAATGAAAGCTTTGGATACTGCAATGGCTTGTGTAGCTCCAACTTCCATGAATAGGCCAAGCATGAAGCATGTAGTTATAGAACTGAAACAATGTTTGGAAAACAAGATTACTCCTCCGTCTGACTCTACTTACACTCATGAGAGCTTACCCAGCAGCACCTTAGATTATGTTTCCTTTGATAGAATTAGTGGTGAGAGCTCTCTAGCGAGGTAA 2652 0.3869 MAGHLLLLAFLTSLIFPFIVHAQNNQSGFISIDCGLVDEPSYTDETTSIYYTRDVNFTDTGVSRSISSKHKASLERQFWNVRSFPEGTRNCYTLFVSQGSSKKYLVRASFVYGNYDGKDSLPEFDVYLGAKRWESVVFEDSSSVITKEIIYAASSDYVHVCLFNIGKGTPFISVLEVRVLNSDAYLVNSLELLARFNVGSKGGPKIRYPDDIYDRIWTPYNSKDWKKIDTSLTIDQGAPFFNFLPLPSSAVMRTTLIPEKDSDNIEFHFLPKYNASRYYVYLYFAEIQKLEPNQIREFNIFVNGKLLNIVNPLYLQSLYYVSVISENKLELWFNKTSRSTLPPLFSAIEVYMTKDLLQSETYQTDVDAIQNVKSIYGIKRNWQGDPCTPMSYLWDGLNCSYVGSDSPKIIYLNLTSSGLFGTIAPSISNLKSIEYLDLSNNSLTGAVPDFLSQLRFLKVLNLEGNKLSGAIPKELLVHPKNSVLKFNFGGNPNLCSSGSCNKGNRNKVVVPLVASLGGAVVVLAVAMISFRIYYKRHQASHQLSKVGAYSRIKQELESKKQEFTYEEVLSITRNFEKVVGKGASGTVYHGWIDDDTEVAVKMLSSSSAQGSLQFQAEAKLFAIVHHKYLTGLIGYCDDGTNMALIYEYMANGDLTNHLSDKNENILSWNQRLQIAVDAAEGLEYLHHGCNPPIVHRDVKSKNILLNEKLQGKLADFGLSKIFPNEGDTHVFTVVAGTPGYLDPEYNRLSKLREKSDVFSFGVVLLEIITGQPAITKTEEKIHIIQWVSSTLVEREVKDIVDPRLQGEFDISSAMKALDTAMACVAPTSMNRPSMKHVVIELKQCLENKITPPSDSTYTHESLPSSTLDYVSFDRISGESSLAR 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi500g00006 883 Pfam Protein kinase domain 576 838 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi500g00006 883 ProSiteProfiles Protein kinase domain profile. 573 862 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi500g00006 883 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 649 852 - -
Vivi500g00006 883 ProSitePatterns Serine/Threonine protein kinases active-site signature. 693 705 IPR008271 GO:0004672|GO:0006468
Vivi500g00006 883 Gene3D - 189 354 - -
Vivi500g00006 883 ProSitePatterns Protein kinases ATP-binding region signature. 579 601 IPR017441 GO:0005524
Vivi500g00006 883 SMART serkin_6 573 839 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi500g00006 883 Pfam Leucine rich repeat 411 467 IPR001611 GO:0005515
Vivi500g00006 883 SUPERFAMILY L domain-like 365 480 - -
Vivi500g00006 883 FunFam Leucine-rich repeat receptor-like kinase 364 497 - -
Vivi500g00006 883 CDD STKc_IRAK 579 843 - -
Vivi500g00006 883 Gene3D Transferase(Phosphotransferase) domain 1 649 859 - -
Vivi500g00006 883 PANTHER OS07G0107800 PROTEIN-RELATED 30 846 - -
Vivi500g00006 883 Gene3D Ribonuclease Inhibitor 366 486 IPR032675 -
Vivi500g00006 883 Pfam Malectin-like domain 32 352 IPR024788 -
Vivi500g00006 883 SUPERFAMILY Protein kinase-like (PK-like) 558 840 IPR011009 -
Vivi500g00006 883 Gene3D Phosphorylase Kinase; domain 1 554 648 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi500g00006 15 845 Receptor kinase-like Gene Family AT2G19210 49.054 0.0 796
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Vivi500g00006 Malectin_like 5.7e-97 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi500g00006 - - psat:127087401 1545.41