Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi500g00002 ATGGCACGACACTTGCTTCTTTTAGTGTTTCTACTTTCTTTGACTTTTCCTTTCATCGTTCATGCTCAGAACAACCAATCAGGATTCATTAGTATTGACTGTGGACTAGTGGATGAACCAAGCTACACAGATGAAACTACTTCCATCTATTACACTTGGGATGTTAATTTCACAGATACTGGTGTAAGCCGCAGTATATCGTCAAAATACAAGGCTTCCCTTGAAAGACAGTTCTGGAATGTTAGAAGCTTCCCAGAAGGAACCAGGAACTGCTACACCCTTTTTGTTTCACAAGGAAGTAGCAAGAAATACTTAGTCAGGGCCAGTTTTGTGTATGGTAATTATGATGGAAAAGACTCTCTTCCTGAATTCGATGTTTACCATGGAGCCAAACGGTGGGAATCTGTGGTGTTTGAGGATTCATCGAGTGTAGTAACTAAGGAAATAATTTATGCTGCTTCCTCAGATTATGTTCATGTTTGTTTGTTCAATATTGGAAAGGGTACACCTTTTATTTCAGTTTTAGAGGTTAGAGTTCTTAACAGTGATGCTTATCTTGCTAACTCTTTGGAGCTTTTGGCAAGGTTTGATGTAGGCTCACAGGGTGGTCCAAAAATCAGATATCCAGATGATATTTATGACAGAATATGGACACCTTATAATTCAACTGACTGGAAAATGATAGATACTTCACTCACCTTAGACCAAAGAGCACCTTCGTTCAATTTCTTACTACTACCACCCTCAACTGTCACGAGAACAGCATCAATTCCAGAAAATGACAGTGACAATATCGAGTTTTACTTCCTTCCCAAGTATAATGCCTCCAGATATTACGTGTATTTGTACTTCACTGAAATCCAGAAACTCGAGGCAAATCAAATTAGAGAGTTCAACATTTTTGTAAATGGGAAGCTTTTAAATAATGATCCAGTCAACCCTTTGTACCTGCAGAACCTGTATTATGTATCAATTATAAGTGTAAATATGTTGGAACTTTGGTTTAATAAGACTAGCAGATCAACTCTTCCACCACTCTTTAATGCGATCGAGATATACACGACAAAGGACTTCTTACAATCAGAAACATATCAAACAGACGTTGATGCTATCCTAAATGTGAAGTCAATTTACGAGATCAAGAGAAAATGGCAGGGAGATCCTTGTGTTCCTGTGTCTTTTTTGTGGGATGGTCTAAACTGCAGCTATGTTGGATCTGATTCGCCAAGGATCATATACTTGAACTTAACTTCCAGCAGCTTAATTGGAACTATAGCTCTTGCCATATCCAATCTAAAGTCGATCGAATATTTGGATTTGTCAAATAACAGTTTGACTGGGGCTGTGCCTGATTTCCTATCTCAGCTACGCTTCTTGCGAGTTTTAAACCTGGAAGGAAATAAGCTATCAGGAGCAATTCCAATAGAACTTCTTGTGCATCCAGAGAATAGTATGCTCAAATTCAATTTTGGTGGAAATCCAAATCTTTGCTCCTTTGGTTCATGCAACAAGGGGAATGGAAATAAGGTTGGGGTTCCATTAGTAGCATCACTCGGAGGAGCTTTCACGATACTAGCAGTAGCAATAATTTCTTTTCGCATATACTACAAGAGGCACCAAGTTTCCCATCGTCTGAGCAAGGTGGGAAGAATAAAGCAGGAACTAGAGTCAAAGAAACAAGAATTTACCTATGAAGAAGTATTAAGCATTACCAGAAACTTTGAAAAGGTTGTGGGAAAAGGAGCATCTGGAACAGTCTACCATGGCTGGATTGATGATGATACTGAGGTAGCTGTCAAAATGCTATCTTCCTCATCAGCTCAAGGATATCTGCAATTTCAAGCAGAGGCCAAACTTTTTGCTATAGTTCATCATAAATACTTGACTGGTCTTATAGGGTATTGTGATGATGGCACCAACATGGCTCTAATTTATGAGTATATGGCTAATGGAGACTTAGCCAAGCACTTATCAGATAAAAATGAAAATATATTGAGTTGGAATCAACGACTTCAAATTGCAACGGAAGCTGCAGAAGGATTGGAGTATCTGCATCATGGGTGCAACCCACCAATTGTTCACAGAGATGTTAAATCTAAAAACATCTTACTAAATGAAAAACTCCAAGGTAAATTAGCTGATTTTGGGTTGTCAAAGATCTTTCCTAATGAAGGTGACACTCATGTCTTCACCGTTGTTGCTGGCACACTTGGATACCTTGACCCGGAGTACAATAGACTAAGCAAGCTGAGAGAAAAAAGTGATGTTTTCAGCTTTGGGGTAGTTTTGCTTGAGATAATAACAGGACAACCTGCCATAATCAAAACTAAAGAAAAAATCCATATTATCCAATGGGTTGGTTCCATGCTGGTGGAAAGAGAGGTAAAGGATATTGTAGATCCCAGATTACAAGGAAAGTTTGATATTTCCTCTGCAACAAAAGCTTTGGATACCGCAATGGCTTGTGTAGCAGCAACTTCCATGAATAGGCCAACCATGAAGCATGTAGTTATGGAACTGAAACAATGTTTGGAAAACAAGATTACTCCTCCGTCTGACTCTACTTACACTTATGAGAATTTATCCAGCACCTTAAATTTTGTTTCCTTTGATGGAATTAGCGGAGAGAGCTCTCTAGCGAGGTAA 2646 0.3881 MARHLLLLVFLLSLTFPFIVHAQNNQSGFISIDCGLVDEPSYTDETTSIYYTWDVNFTDTGVSRSISSKYKASLERQFWNVRSFPEGTRNCYTLFVSQGSSKKYLVRASFVYGNYDGKDSLPEFDVYHGAKRWESVVFEDSSSVVTKEIIYAASSDYVHVCLFNIGKGTPFISVLEVRVLNSDAYLANSLELLARFDVGSQGGPKIRYPDDIYDRIWTPYNSTDWKMIDTSLTLDQRAPSFNFLLLPPSTVTRTASIPENDSDNIEFYFLPKYNASRYYVYLYFTEIQKLEANQIREFNIFVNGKLLNNDPVNPLYLQNLYYVSIISVNMLELWFNKTSRSTLPPLFNAIEIYTTKDFLQSETYQTDVDAILNVKSIYEIKRKWQGDPCVPVSFLWDGLNCSYVGSDSPRIIYLNLTSSSLIGTIALAISNLKSIEYLDLSNNSLTGAVPDFLSQLRFLRVLNLEGNKLSGAIPIELLVHPENSMLKFNFGGNPNLCSFGSCNKGNGNKVGVPLVASLGGAFTILAVAIISFRIYYKRHQVSHRLSKVGRIKQELESKKQEFTYEEVLSITRNFEKVVGKGASGTVYHGWIDDDTEVAVKMLSSSSAQGYLQFQAEAKLFAIVHHKYLTGLIGYCDDGTNMALIYEYMANGDLAKHLSDKNENILSWNQRLQIATEAAEGLEYLHHGCNPPIVHRDVKSKNILLNEKLQGKLADFGLSKIFPNEGDTHVFTVVAGTLGYLDPEYNRLSKLREKSDVFSFGVVLLEIITGQPAIIKTKEKIHIIQWVGSMLVEREVKDIVDPRLQGKFDISSATKALDTAMACVAATSMNRPTMKHVVMELKQCLENKITPPSDSTYTYENLSSTLNFVSFDGISGESSLAR 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi500g00002 881 ProSitePatterns Serine/Threonine protein kinases active-site signature. 692 704 IPR008271 GO:0004672|GO:0006468
Vivi500g00002 881 SMART serkin_6 572 844 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi500g00002 881 ProSiteProfiles Protein kinase domain profile. 572 844 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi500g00002 881 FunFam Leucine-rich repeat receptor-like kinase 366 498 - -
Vivi500g00002 881 SUPERFAMILY L domain-like 371 496 - -
Vivi500g00002 881 Pfam Leucine rich repeat 413 469 IPR001611 GO:0005515
Vivi500g00002 881 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 648 851 - -
Vivi500g00002 881 Gene3D Ribonuclease Inhibitor 368 488 IPR032675 -
Vivi500g00002 881 Gene3D Transferase(Phosphotransferase) domain 1 648 860 - -
Vivi500g00002 881 Gene3D Phosphorylase Kinase; domain 1 553 647 - -
Vivi500g00002 881 ProSitePatterns Protein kinases ATP-binding region signature. 578 600 IPR017441 GO:0005524
Vivi500g00002 881 SUPERFAMILY Protein kinase-like (PK-like) 557 840 IPR011009 -
Vivi500g00002 881 Pfam Protein kinase domain 575 837 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi500g00002 881 PANTHER OS07G0107800 PROTEIN-RELATED 30 845 - -
Vivi500g00002 881 Pfam Malectin-like domain 32 354 IPR024788 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi500g00002 16 844 Receptor kinase-like Gene Family AT2G19210 49.465 0.0 802
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Vivi500g00002 Malectin_like 1.1e-99 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi500g00002 - - psat:127087401 1545.41