Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05984 ATGGCTGTGAAAAACTCGGCGGTGTTAATAGTTGCTACTTGTGTTTATCTCTTTTCCATCATCACTACTACTCTTGTTGTTGCTGAAGATCCATATAGATTCTTCAGCTGGAACATTACATACGGTGACATTTATCCCCTTGGTGTTCGCCAACAGGGTATACTTATCAATGGGCAATTTCCAGGTCCAGACATTCATTCTGTCACAAACGATAATCTCATTATCAATGTCTTCAACAACTTAGACCAACCCTTTCTCTTATCCTGGAATGGAATCCAGCAGAGAAGAAACTCATATGAAGATGGTGTGTTTGGAACAACATGTCCCATTCCTCCCGGACAGAACTTCACATACATACTTCAAGTCAAAGATCAAATTGGTAGTTTCTATTATTTCCCATCTCTTTCATTCCACAAAGCTGCTGGTGCTTTTGGAGGCATCAGGATCCTAAGTAGGCCAAGAATTCCAGTTCCATTCGATGATCCTGCTGGTGATTACACTGTCCTTATTGGAGATTGGTACAAATCCAATCACACTGATTTGAAAGTTCAACTTGATAATGGTAAGAAGTTGCCTTTCCCTGATGGCATTCTTATCAATGGCCGTGGCTCTGGAGGATCATCTTTCAATGTCGAGCAAGGAAAGACTTACAGGCTTAGAATATCAAATGTGGGCTTGCAAAATTCACTCAACTTTCGCATACAAAACCACAATTTAAAGCTAGTAGAAGTTGAAGGAACACACACGCTTCAAACCACATACTCATCCCTTGATGTTCACGTTGGTCAATCTTACTCCGTTCTAGTTACCGCGGATCAACCAGGTCAAGACTATTACATTGTTGTTTCCTCTCGGTTTACTACTCCAGTACTCACCTCGACTGGAGTTCTTCGCTATAGCAACTCTGCAGGCGCAGTTTCAGGCCCACCTCCTGGCGGACCTACTATCCAAATTGACTGGTCCTTGAACCAGGCCCGCTCCATCAGGACAAACTTGACAGCAAGTGGACCAAGACCAAATCCACAAGGATCATACCATTACGGCATGATAAACACGACCAGGACAATCGTACTTTCAAGTTCAGCTGGACAAGTAAATGGAAAGCAAAGATATGCGATTAACAGCGTGTCCTATGTTTCCCCCGACACTCCTCTTAAGCTAGCTGATTTCTTCAAGATATCAGGTGTTTACCGTCCTGGCAGCATATCTGATAGACCAAGCGGCGGTGGTATATACACCGACACTTCTGTTATGCAAACTGACTACAGAGCATATGTAGAGATTGTTTTCCAAAATGATGAAGACATTCTTCAGAGCTATCATCTTGATGGCTACTCTTTCTTTGTGGTTGGTATGGATGGAGGACAATGGACAAGTGATAGCAGGAAAGAGTACAATCTTCGAGATGCAGTTTCGCGTTGCACAACTCAGGTATATCCAAAGTCATGGACTGCTATATATATTCCACTTGACAATGTGGGAATGTGGAACTTGAGGTCAGAGTTTTGGGCAAGGCAATACCTTGGGCAACAGTTTTACTTGCGTGTATACACAGACTCAACATCACTCAGAGATGAATATCCTATTCCTAAGAATGCGTTACTTTGTGGTAGGGCTACCGGAAGACATACTCGTCCTCTTTGA 1644 0.4288 MAVKNSAVLIVATCVYLFSIITTTLVVAEDPYRFFSWNITYGDIYPLGVRQQGILINGQFPGPDIHSVTNDNLIINVFNNLDQPFLLSWNGIQQRRNSYEDGVFGTTCPIPPGQNFTYILQVKDQIGSFYYFPSLSFHKAAGAFGGIRILSRPRIPVPFDDPAGDYTVLIGDWYKSNHTDLKVQLDNGKKLPFPDGILINGRGSGGSSFNVEQGKTYRLRISNVGLQNSLNFRIQNHNLKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPGQDYYIVVSSRFTTPVLTSTGVLRYSNSAGAVSGPPPGGPTIQIDWSLNQARSIRTNLTASGPRPNPQGSYHYGMINTTRTIVLSSSAGQVNGKQRYAINSVSYVSPDTPLKLADFFKISGVYRPGSISDRPSGGGIYTDTSVMQTDYRAYVEIVFQNDEDILQSYHLDGYSFFVVGMDGGQWTSDSRKEYNLRDAVSRCTTQVYPKSWTAIYIPLDNVGMWNLRSEFWARQYLGQQFYLRVYTDSTSLRDEYPIPKNALLCGRATGRHTRPL 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05984 547 Gene3D - 162 338 IPR008972 -
Vivi4g05984 547 Gene3D - 32 153 IPR008972 -
Vivi4g05984 547 Pfam Multicopper oxidase 383 519 IPR011706 GO:0005507|GO:0016491
Vivi4g05984 547 Gene3D - 348 543 IPR008972 -
Vivi4g05984 547 Pfam Multicopper oxidase 165 301 IPR001117 -
Vivi4g05984 547 SUPERFAMILY Cupredoxins 349 538 IPR008972 -
Vivi4g05984 547 FunFam L-ascorbate oxidase homolog 32 153 - -
Vivi4g05984 547 SUPERFAMILY Cupredoxins 159 339 IPR008972 -
Vivi4g05984 547 FunFam Monocopper oxidase-like protein 163 337 - -
Vivi4g05984 547 PANTHER MULTI-COPPER OXIDASE 51 512 IPR045087 -
Vivi4g05984 547 SUPERFAMILY Cupredoxins 24 179 IPR008972 -
Vivi4g05984 547 CDD CuRO_1_AAO_like_1 34 149 IPR034273 GO:0005507
Vivi4g05984 547 CDD CuRO_3_AAO_like_1 381 501 IPR034275 GO:0005507
Vivi4g05984 547 FunFam Monocopper oxidase-like protein 349 546 - -
Vivi4g05984 547 Pfam Multicopper oxidase 39 152 IPR011707 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05984 Vivi-Chr4 197080531 197084119 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05984 - - gmx:100812416 984.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05984 4 197080531 197084119 Vivi4g05984 4 197080531 197084119 ECH
Vivi4g05984 4 197080531 197084119 Vivi3g00693 3 11533071 11537852 PCT