Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05983 ATGGAGGAACAAAAGGAGCCGGAGTTGGTGCAAGTCGCCGCCGAGTTAACAGAAGTGGTTCAGTCTCTTCCTTCCGACGCCGTTAACCACTTGTTCTCCCTCGGGTTATGCGTGCGCTGCATCTTTCGTGTATTCGGCGTCCAAGCCACCACTGTCTATGCTTCACCTTCGCTATTCGGTCTTCAATCACCAACAGATAAACTCTGCACCCTCTGCTTAGGTATCCTTCAGTTTAGATTTCGCAATGACGACAACACTAGTATAACGGACGATGTTCCTCTCCTCATTTCCGATTTCGTTAAACGTGAGGGCTATCACTGTGATTCCTTTTCCCTCGAAGTTTCCATACCACAAATTATCCAACACAACGATAACTCTCTTCGCTCATACATGAAAACCAAATATGGATCTCAACCTTGGTTCCAAGACACTTGCATATCTGCAAAGGAGGCCTTCAAATTTTCTATAATGCATCCTCTTCAAAATCTCCTGGAATGTAAATCAAGTACGGATTCTCTCCGCATCCGTTTGACATACAGCGTGTCAAAAGAGGCTGAGAAATCATGTTCGGATAATGTTGACAGTTGTAAGAGAAGAAAAACAGATGAATGCAATTTAGTTGGACAAAAGCCTTCTAGCAGTTCGCCGGAAAACGAATCCTCTGATTGCTGTAAATTCTTGCTGGAAATGGCAAATGAACCTTGCCATTTTACTTACCTTTGCTATAGAGCACCTTTATATTTTGGTGGAAGATACCTGAAGTATTCGCGGAATGTGAGTCAATCACGTTGGATCATTGACGATGAAAGAATGGGGGAAGCATCAGTAGAGGAAATAATTGGTGGAAACATCCTCCCAGTATGCCAAGCTGATAGTTTCAAGTTTCATGCTGCCGGAAGAGAAGATATTGATGTTCGAATGCTGGGCCTAGGCAGGCCATTCCTTGTTGAGGTGCAAAATGCACGACAAGTCCCATCTGAACAGTTTGTTAAAGATATAGAGAAAAAGATAAATAGCATGGAGAATAAATTGGTTAGAGTGAAAAATCTGAAACTTGTTGGCAGTCATGGCTGGGACCTCATGCGTGAAGGAGAAGCTGAGAAGCAGAAGCAATATGCTGCTTTAGTGTGGATTTCTCGTCCTCTGAAGGATGAAGATTATCAACACGTGTCTTCACTCAAGGATTTGAAAGTTTTGCAAAGGACCCCAATCAGGGTGCTACACCGTCGTAGTCCTTTAGAACGTGAAAAAATCATTCATTGGATGAAAATGGAGACAATTGCTGGAAGTTCCCAATATTTCCTTTTGCATCTATGTACACAGGCTGGGACCTACATCAAGGAATTCGTTCATGGGGATCTTGGACGCACACATCCTAGCATTGGATCTATGTTCGGATGTAGAGCTGAAATTTTGCAACTTGATGTGACAGACATCAAGATGGAATGTTTCCTGACTTAA 1461 0.4298 MEEQKEPELVQVAAELTEVVQSLPSDAVNHLFSLGLCVRCIFRVFGVQATTVYASPSLFGLQSPTDKLCTLCLGILQFRFRNDDNTSITDDVPLLISDFVKREGYHCDSFSLEVSIPQIIQHNDNSLRSYMKTKYGSQPWFQDTCISAKEAFKFSIMHPLQNLLECKSSTDSLRIRLTYSVSKEAEKSCSDNVDSCKRRKTDECNLVGQKPSSSSPENESSDCCKFLLEMANEPCHFTYLCYRAPLYFGGRYLKYSRNVSQSRWIIDDERMGEASVEEIIGGNILPVCQADSFKFHAAGREDIDVRMLGLGRPFLVEVQNARQVPSEQFVKDIEKKINSMENKLVRVKNLKLVGSHGWDLMREGEAEKQKQYAALVWISRPLKDEDYQHVSSLKDLKVLQRTPIRVLHRRSPLEREKIIHWMKMETIAGSSQYFLLHLCTQAGTYIKEFVHGDLGRTHPSIGSMFGCRAEILQLDVTDIKMECFLT 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05983 486 Gene3D - 370 480 - -
Vivi4g05983 486 NCBIfam tRNA pseudouridine(54/55) synthase Pus10 244 480 - -
Vivi4g05983 486 Coils Coil 330 350 - -
Vivi4g05983 486 FunFam tRNA pseudouridine synthase Pus10 370 480 - -
Vivi4g05983 486 SUPERFAMILY Pseudouridine synthase 366 480 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Vivi4g05983 486 Gene3D - 245 369 - -
Vivi4g05983 486 FunFam tRNA pseudouridine synthase Pus10 245 369 - -
Vivi4g05983 486 PANTHER UNCHARACTERIZED 63 483 IPR039894 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05983 K07583 - gmx:100780683 711.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05983 4 197067928 197077601 Vivi4g05983 4 197067928 197077601 ECH