Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05982 ATGTTGTCATTTTCACGTTTCGTTCCTCGTTTTTTCACATTATCACCATTCAAATCTCATTCTTCTTCTTCTACATTCCTCAACACAACAACAATGGGTTCACTTTCTGTCTTTGAACAACAAACCATTCAATATCCTATTCTTCGTAGAGATGACTCCGTTGTTGACAACTATCACGGTGTTGACATTCCCGACCCTTACCGGTGGCTTGAAAATCCTGATGCAGAAGAAGTTAAAGAGTTTGTACAACAACAGGTTGCTTTAACGGATTCAGTGTTGAAGACAATCGATGTTAGAGCTAAACTTGGTGATACAATCAAAAAAGTATATGATCATCCTCGTTATAGTGCTCCTTTCAAAAGAGATGATAAATACTTTTACTTTCATAATACTGGTCTTCAATCTCAGAGTGTCCTCTATGTTCAGGATAGTTTGGAGGGTGAAGCAGAGGTTTTGCTTGACCCTAATGTTCTCAGTGAAGATGGCACAGTTTCACTCAACAGCTTATCTGTTAGCAAAGATGCTAAGTTTTTGGCTTATGGACTCAGTTCCAGTGGTAGTGATTGGGCTACTATAAAGGTCATGCGTGTTCATGACAAGGTTGTGCAACCTGATACTTTGTCTTGGGTGAAGTTTTCTTCTACTAGTTGGACACATGATAGCAAAGGTTTCTTTTACAGCCGCTTTCCGGCTCCAACAATCAAGGATGGAGATGTAGTAGATGCTGGGACTGAGACTGATACTAACCTTTATCATGAGCTATATTATCATTTTCTCGGTACCGATCAATCACAAGATATTCTGTGCTGGAGAGATCCTCACAACCCTAAATATATGTTTGATGGAACTGTCACCGATGACGGAAAGTATGTTATTCTCATTATTTCAGAGGGGTGTGATCCAGTCAACAAAATATATTACTTCGACTTGTCGGAACTTCCTGATGGTTTGGAAGGTTTTCGAAATGAGAAATCCTTCCTCCCTTTTGTCAAGCTTATTGATAACTTTGATGCAAGTTATGAACCTGTTGCAAATGATGACACTGTGTTTACATTTTTGACTAATAAAGATGCTCCAAAATATAAACTAGTCCGGGTTGATTTGAAAGAACCAAATACTTGGACTGATGTTATTCAAGAATCTGAAACAGATGTGCTCAAGTCAGCATTTGCTGTAAACGGTAACCAACTAATTGTGAGCTACTTGAGTGATGTGAAATTTGTTCTACAAGTAAGAGACTTAGAAACAGGTTCCCTGCAGCATCAAATACCAATTGACATTGGCACAGTTAGTGAAATTTCTGCAAGGCGTCAAGATAGTGTGGTTTTCATTGCCTTTTCAAGCTTTTTGACTCCTGGTATCATATATCAGTGTAACCTGGGGGGAACACAGATTCCTGATATGAAGATATTTCGTGAGATTGAGGTCCCTGGGTTTGATCGCTCAGAATTTCAGGTCAATCAGGTTTTTGTGCCTAGTAAAGACGGAACGAAGGTACCGATGTTCATTGTTGCAAGAAAGGATATAACTTTGAATGGTTCACACCCTTGTTTGTTATACGGATATGGTGGTTTTAACATCAGTCTTACACCAAATTTCAATGTCAGTCGTATTGTCATTGCAAGACATTTAGGTTCTGTTTTTTGCTTAGCAAATATTCGTGGTGGTGGAGAATACGGAGAGAAATGGCATAAAGCAGGAGCCCTTTCAAATAAGCAAACATGCTTTGACGACTTCATTTCTGCAGCTGAATACCTTGTATCTGCCGGTTATACCCAACCCAAAAAGTTATGCATCGAAGGTGGAAGCAATGGTGGACTTCTTGTTGGCGCTTGCATTAATCAGAGACCTGATCTTTTTGGTTGTGCACTGGCTCATGTTGGTGTTATGGACATGTTACGGTTCCACAAATTCACTATAGGTCATACTTGGACCACAGAATTTGGCAGTTCTGACAAGGAGGAAGAATTTCATTGGATAATCAAGTACTCGCCATTGCATAATGTCCGGAGACCATGGGAACAACATCCAAATAAGTCAGTCCAGTATCCATCGACAATGCTATTGACAGCTGATCATGATGATCGTGTGGTGCCATTGCATTCATTGAAGCTATTAGCGACCTTGCAGCATGTCCTTGTCACTAGCCTGGATAAAAGTCCTCAGACGAACCCTATAATTGCTCGAATTGAATGCAATGCTGGACATGGAGCTGGACGTCCCACGCAGAAAATTATTGATGAAGCCGCTGACCGGTACGGTTTTATGGCAAAGATGTTAGAGGCTCATTGGATTGAGTAG 2301 0.4029 MLSFSRFVPRFFTLSPFKSHSSSSTFLNTTTMGSLSVFEQQTIQYPILRRDDSVVDNYHGVDIPDPYRWLENPDAEEVKEFVQQQVALTDSVLKTIDVRAKLGDTIKKVYDHPRYSAPFKRDDKYFYFHNTGLQSQSVLYVQDSLEGEAEVLLDPNVLSEDGTVSLNSLSVSKDAKFLAYGLSSSGSDWATIKVMRVHDKVVQPDTLSWVKFSSTSWTHDSKGFFYSRFPAPTIKDGDVVDAGTETDTNLYHELYYHFLGTDQSQDILCWRDPHNPKYMFDGTVTDDGKYVILIISEGCDPVNKIYYFDLSELPDGLEGFRNEKSFLPFVKLIDNFDASYEPVANDDTVFTFLTNKDAPKYKLVRVDLKEPNTWTDVIQESETDVLKSAFAVNGNQLIVSYLSDVKFVLQVRDLETGSLQHQIPIDIGTVSEISARRQDSVVFIAFSSFLTPGIIYQCNLGGTQIPDMKIFREIEVPGFDRSEFQVNQVFVPSKDGTKVPMFIVARKDITLNGSHPCLLYGYGGFNISLTPNFNVSRIVIARHLGSVFCLANIRGGGEYGEKWHKAGALSNKQTCFDDFISAAEYLVSAGYTQPKKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRFHKFTIGHTWTTEFGSSDKEEEFHWIIKYSPLHNVRRPWEQHPNKSVQYPSTMLLTADHDDRVVPLHSLKLLATLQHVLVTSLDKSPQTNPIIARIECNAGHGAGRPTQKIIDEAADRYGFMAKMLEAHWIE 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05982 766 Gene3D alpha/beta hydrolase 54 756 IPR029058 -
Vivi4g05982 766 SUPERFAMILY alpha/beta-Hydrolases 484 739 IPR029058 -
Vivi4g05982 766 PANTHER PROLYL ENDOPEPTIDASE 37 764 - -
Vivi4g05982 766 FunFam Prolyl endopeptidase 443 756 - -
Vivi4g05982 766 FunFam Prolyl endopeptidase 113 475 - -
Vivi4g05982 766 Pfam Prolyl oligopeptidase family 532 761 IPR001375 GO:0006508|GO:0008236
Vivi4g05982 766 ProSitePatterns Prolyl endopeptidase family serine active site. 578 608 IPR002471 GO:0004252|GO:0006508
Vivi4g05982 766 Pfam Prolyl oligopeptidase, N-terminal beta-propeller domain 46 461 IPR023302 GO:0004252
Vivi4g05982 766 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 543 567 IPR002470 GO:0004252|GO:0006508
Vivi4g05982 766 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 683 705 IPR002470 GO:0004252|GO:0006508
Vivi4g05982 766 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 571 590 IPR002470 GO:0004252|GO:0006508
Vivi4g05982 766 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 516 534 IPR002470 GO:0004252|GO:0006508
Vivi4g05982 766 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 601 621 IPR002470 GO:0004252|GO:0006508
Vivi4g05982 766 Gene3D - 113 475 - -
Vivi4g05982 766 SUPERFAMILY Peptidase/esterase 'gauge' domain 42 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05982 Vivi-Chr4 197063407 197067094 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05982 516 638 Carbohydrate Esterase AT5G36210 30.709 5.50e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05982 K01322 - gmx:100812955 1293.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05982 4 197063407 197067094 Vivi4g05982 4 197063407 197067094 ECH
Vivi4g05982 4 197063407 197067094 Vivi3g00689 3 11471719 11477418 PCT