Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05976 ATGTTGAAAAGGCGCAAGATGTTCTTATGCATAAAAGATTGCAGAATATGGCAAGAACTATTGCTACTAGACCTGCAATTGAAGTCCGTCTTCTCCAGACCAATGCATGAAATCACAATTTCAACCAGCGATAAGCCAAAACTTTTCAGTCAGTTGACTACCTTACTCTCTGAGATTGGGCTGAACATTCAAGAAGCACACGCATTTTCCACATTGGATGGATATTCATTGGATGTTTTTGTTGTAGATGGTTGGGCAGGCCAGGATACTGAGAGGCTCAAGCATGAAGTGATAAAGAAAATGCAGAAACTCGAGAAAAATCAATGGTTTCCCTTGTCTCCTTTTCCCAAGGAGACCGAGATATCAAAACATATTCCAAAAAAGAAAATTAAGAAACTCGAGAAGCAACCCTGGTGCAGTCTTCCTAAGGAGAAACTAGAGAAAATTGGAATGAACTATAAGCCCATCAGTAGAAATTATGTATGGGAAATTGATGCAAGCTGTTTAAGATATGAGAGGAAAATGGCCTCTGGATCAGTCAGTGATTTGTACAAAGGCACTTATATTAATCAAGATGTGGCTATCAAAGTCTTTAAGAATGGTAGTCTGAATGGAAATACACAGAGGGAGTTTTCTCAGGAAATCTTTATTCTGAGTAATGTTCAGCACAAGAATGTTATCAAATTTATTGGTGCGGCTACGAAACCAAACTTTCATTTTGTCACAGAATATATGTCTGGCGGAAATATGTATGACTTTCTGCATATACAGAAGACCATACTTACTCTTCCTTCTTTGCTCAAAGTAGCAATTGATGTATCCCAAGGAGTGAAATATTTGCATCAGAACAACATTATACATCGAGACCTCAAAACTGCCAATCTTTTGATGGATGAGAAGGGGCAGGTAGTTAAAGTTGCTGATTTTGGTGTAGCCAGATTGCAAGACAAATCTGGCATCATGACTGCAGAAACTGGAACATACCGGTGGATGGCTCCAGAGGTTATTCAACATAAGCCATATAATCACAAAGCTGATGTTTTCAGCTTTGGGATTATTCTTTGGGAGCTTCTCACAAGAAAGCTTCCTTATGAAGATTTGTCCCCATTGCAAGCAGCAGTTGGAGTAGTGCATAAGGATTTGAGGCCTGAAATTCCAAGGGATGCACATCCAAAGTTAGTGGAATTGCTTCACTGGTGCTGGCATAAAGATCCGTCTTTAAGGCCCGATTTCTCAGAAATTCTTAAGTTTCTACAGCACATGAACAACATGATTGCAGGGAAAAAGAAGGTAAAGGTTAAAGGGAAGATGTGA 1314 0.3935 MLKRRKMFLCIKDCRIWQELLLLDLQLKSVFSRPMHEITISTSDKPKLFSQLTTLLSEIGLNIQEAHAFSTLDGYSLDVFVVDGWAGQDTERLKHEVIKKMQKLEKNQWFPLSPFPKETEISKHIPKKKIKKLEKQPWCSLPKEKLEKIGMNYKPISRNYVWEIDASCLRYERKMASGSVSDLYKGTYINQDVAIKVFKNGSLNGNTQREFSQEIFILSNVQHKNVIKFIGAATKPNFHFVTEYMSGGNMYDFLHIQKTILTLPSLLKVAIDVSQGVKYLHQNNIIHRDLKTANLLMDEKGQVVKVADFGVARLQDKSGIMTAETGTYRWMAPEVIQHKPYNHKADVFSFGIILWELLTRKLPYEDLSPLQAAVGVVHKDLRPEIPRDAHPKLVELLHWCWHKDPSLRPDFSEILKFLQHMNNMIAGKKKVKVKGKM 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05976 437 SUPERFAMILY ACT-like 35 103 IPR045865 -
Vivi4g05976 437 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 91 421 - -
Vivi4g05976 437 SUPERFAMILY Protein kinase-like (PK-like) 151 418 IPR011009 -
Vivi4g05976 437 PRINTS Tyrosine kinase catalytic domain signature 345 367 IPR001245 GO:0004672|GO:0006468
Vivi4g05976 437 PRINTS Tyrosine kinase catalytic domain signature 326 336 IPR001245 GO:0004672|GO:0006468
Vivi4g05976 437 PRINTS Tyrosine kinase catalytic domain signature 279 297 IPR001245 GO:0004672|GO:0006468
Vivi4g05976 437 PRINTS Tyrosine kinase catalytic domain signature 242 255 IPR001245 GO:0004672|GO:0006468
Vivi4g05976 437 PRINTS Tyrosine kinase catalytic domain signature 389 411 IPR001245 GO:0004672|GO:0006468
Vivi4g05976 437 Gene3D Transferase(Phosphotransferase) domain 1 247 436 - -
Vivi4g05976 437 CDD STKc_MAP3K-like 175 418 - -
Vivi4g05976 437 SMART serkin_6 169 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g05976 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 285 297 IPR008271 GO:0004672|GO:0006468
Vivi4g05976 437 Pfam Protein tyrosine and serine/threonine kinase 170 418 IPR001245 GO:0004672|GO:0006468
Vivi4g05976 437 Gene3D Phosphorylase Kinase; domain 1 157 246 - -
Vivi4g05976 437 ProSiteProfiles ACT domain profile. 37 112 IPR002912 -
Vivi4g05976 437 ProSiteProfiles Protein kinase domain profile. 169 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05976 Vivi-Chr4 196993524 197000923 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05976 32 434 MAP Kinase Kinase Kinase AT4G35780 56.049 1.44e-156 453
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Vivi4g05976 PK_Tyr_Ser-Thr 1.1e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05976 - - gmx:100818047 516.924