Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05966 ATGGCTTCAATCACCCACTGCAGCAATTTCATATGCAAGCCCTCAATCCCTTCTTCAATCACATCCCTCCCTAAGTTCCCTACCCTTCACTCCCTTCGTTCTTCTTTACCAAATTTTCATCCTCCATCGCTACTCTCTCACACAAAGACTCGTGTTGTTATCACAAAAGCCACGGCAGCTCCTGGTGCAAAGAAAAAAGATGAACGAGTTCAAAAAGTCCACAGCATAGAAGAATTCGACCAAGCACTTCAATCCGCAAAAGACAAACTCGTAGTAGTCGAATACGCCACCAAAGAGAATCCAGAAAGCACCGAGATATACCCTTTCTTAGTCGACCTCAGTCGAACCTGCAACGACGTTGAGTTCATCCTCGTCATGGGAGACGAATCCGAGAAAACCAAAGAACTCTGCAAAAGAGAAAAAGTAGACAAAGTACCTCACTTCACTTTCTACAAAAGCAACGTAAAAATCCACGAAGAAGAAGCTATTGGACCTGACATGCTTGTCGGAGACGTGCTCTACTACGGTGACAGCCATTCAGCGGTGGTGCAACTTCACAACAGAGAAGATGTTGAGAAACTTATCGAAGATCATAAGGTTGATCATAAGCTTATCGTGCTTGATGTTGGATTGAAACATTGTGGTCCTTGTGTTAAGGTTTATCCGACAGTGATAAAGCTGTCGAGACAAATGAATGATACGGTTATTTTTGCGAGGATGAATGGTGATGAGAATGAAAGCTGTATGCAGTTTTTGGGGGACATGAAAGTGATTCAAGTTCCAACGTTTTTGTTCATAAGAGATGGGAAGATTTGTGGAAGGTATGTTGGTTCAGGGAAAGGGGAGCTTATTGGTGAAATCCTTAGGTACCAAGGGGTGCGTGTTACTTATTAA 894 0.4306 MASITHCSNFICKPSIPSSITSLPKFPTLHSLRSSLPNFHPPSLLSHTKTRVVITKATAAPGAKKKDERVQKVHSIEEFDQALQSAKDKLVVVEYATKENPESTEIYPFLVDLSRTCNDVEFILVMGDESEKTKELCKREKVDKVPHFTFYKSNVKIHEEEAIGPDMLVGDVLYYGDSHSAVVQLHNREDVEKLIEDHKVDHKLIVLDVGLKHCGPCVKVYPTVIKLSRQMNDTVIFARMNGDENESCMQFLGDMKVIQVPTFLFIRDGKICGRYVGSGKGELIGEILRYQGVRVTY 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05966 297 ProSiteProfiles Thioredoxin domain profile. 54 200 IPR013766 -
Vivi4g05966 297 PANTHER THIOREDOXIN-LIKE PROTEIN CDSP32, CHLOROPLASTIC 46 297 IPR044192 GO:0016671
Vivi4g05966 297 Gene3D Glutaredoxin 57 170 - -
Vivi4g05966 297 Pfam Thioredoxin 73 159 IPR013766 -
Vivi4g05966 297 Pfam Thioredoxin 193 282 IPR013766 -
Vivi4g05966 297 SUPERFAMILY Thioredoxin-like 71 159 IPR036249 -
Vivi4g05966 297 SUPERFAMILY Thioredoxin-like 176 284 IPR036249 -
Vivi4g05966 297 Gene3D Glutaredoxin 175 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05966 Vivi-Chr4 196985310 196986422 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05966 - - cam:101508233 464.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05966 4 196985310 196986422 Vivi4g05966 4 196985310 196986422 ECH