Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05960 ATGGATCTTCAGGCTTTCCTTATTCGTGCTCGAATCTTCAAACTTTACAGACAAGCTCTGAGAGTTGCCGGTCGAGCACCTCCTCCTGCTAGAGATGAACTGAGACAAATGATTAGACAAGAGATGGAGAATAATCGAAATTGCAATGACAAGCAAAGGATCCGTTACTTGATTAGTGAAGGCTTGGAAAAATTGAAACGCCTCGATGAAATGCTTGATATGCAAGGTCATTAG 234 0.4188 MDLQAFLIRARIFKLYRQALRVAGRAPPPARDELRQMIRQEMENNRNCNDKQRIRYLISEGLEKLKRLDEMLDMQGH 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05960 77 CDD Complex1_LYR_LYRM2 7 68 IPR045293 -
Vivi4g05960 77 PANTHER LYR MOTIF-CONTAINING PROTEIN 2 4 77 - -
Vivi4g05960 77 Pfam Complex 1 protein (LYR family) 11 66 IPR008011 -
Vivi4g05960 77 Coils Coil 31 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05960 Vivi-Chr4 196830302 196831089 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05960 - K02357 gmx:100782536 131.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05960 4 196830302 196831089 Vivi4g05960 4 196830302 196831089 ECH