Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05952 ATGGCATCAGCTATTGGCATTGTGATGATCATGATGATGATGGTGTCCTTAACCTGTGTAGCAAGTGATCTAAGTGTGGATTACTATGAGCATACATGCCCTCATGTAGACTCCATTGTAGCTGGTGCCGTACACAAAGCAACCATGAATGACAAAACAGTTCCATCTGCTTTGCTTCGCATGCATTTTCATGATTGCTTCATAAGGGGGTGTGATGGGTCTATTCTCTTGGAATCAAAGGGAAAGAACAAAGCAGAAAAAGATGGGCCACCAAACATATCATTGCATGCTTTTTATGTAATTGAGAATGCTAAGAAAGCATTGGAAGCCATTTGTCCTGGTGTTGTTTCTTGTTCTGATATTTTGGCTCTTGCTGCTAGGGATGCTGTCACTCTGTCTGGAGGGCCAAGTTGGGAAGTACCTAAAGGAAGAAAGGATGGTAGAATCTCAAAGGCTATTGAAACAAGACAATTACCAGCTCCCACTTTCAACATCTCTCAATTACAACAAAGCTTCTCTCAAAGAGGACTTTCTTTACAAGATCTTGTTGCCCTCTCTGGAGGTCACACCCTAGGATTTGCGCATTGTTCATCCTTCCAAAATAGAATCCATAGATTCAGCCCCAAACAAGGCATTGACCCATCTTTGAACCCATCATTTGCAAAAACCCTCCAAAGCAAATGTCACATTGGAAACAAGGTGAAAAATGCAGGGTCCCCATTGGATTCAAGTGCAACATATTTTGATAATGCTTACTACAAACTACTAGTTGGAGGAAAAAGTATACTCTCTTCTGATCAAGCTTTACTCTCTCATCCAACCACTAAAGCATTGGTTTCCAAATATGCTGATTCCCAAATTGAATTTGAAAGAGCTTTTGTTAAATCTATGATTAAAATGAGTAGCATCACCAATGGTGGACACGAAATCAGACTCCAATGTAATGTCATTAGATGA 957 0.4033 MASAIGIVMIMMMMVSLTCVASDLSVDYYEHTCPHVDSIVAGAVHKATMNDKTVPSALLRMHFHDCFIRGCDGSILLESKGKNKAEKDGPPNISLHAFYVIENAKKALEAICPGVVSCSDILALAARDAVTLSGGPSWEVPKGRKDGRISKAIETRQLPAPTFNISQLQQSFSQRGLSLQDLVALSGGHTLGFAHCSSFQNRIHRFSPKQGIDPSLNPSFAKTLQSKCHIGNKVKNAGSPLDSSATYFDNAYYKLLVGGKSILSSDQALLSHPTTKALVSKYADSQIEFERAFVKSMIKMSSITNGGHEIRLQCNVIR 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05952 318 ProSiteProfiles Plant heme peroxidase family profile. 23 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi4g05952 318 ProSitePatterns Peroxidases proximal heme-ligand signature. 181 191 IPR019793 -
Vivi4g05952 318 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi4g05952 318 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi4g05952 318 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi4g05952 318 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi4g05952 318 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi4g05952 318 PRINTS Plant peroxidase signature 180 192 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi4g05952 318 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi4g05952 318 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi4g05952 318 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi4g05952 318 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi4g05952 318 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi4g05952 318 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi4g05952 318 PRINTS Haem peroxidase superfamily signature 181 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi4g05952 318 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi4g05952 318 FunFam Peroxidase 159 300 - -
Vivi4g05952 318 SUPERFAMILY Heme-dependent peroxidases 24 317 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vivi4g05952 318 Pfam Peroxidase 43 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi4g05952 318 PANTHER PEROXIDASE 25-RELATED 14 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi4g05952 318 CDD secretory_peroxidase 24 317 IPR033905 GO:0004601|GO:0042744
Vivi4g05952 318 FunFam Peroxidase 27 171 - -
Vivi4g05952 318 Gene3D Peroxidase, domain 2 159 300 - -
Vivi4g05952 318 Gene3D - 27 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05952 Vivi-Chr4 196735867 196737926 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05952 2 318 Peroxidase AT5G42180 69.716 4.38e-170 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05952 K00430 - gmx:100820056 511.916