Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05946 ATGTTCATAACAAATGGTGCTTTCATTGAGAGAAAAGCCATGACTCCACCTTCTCCTTCCATGGAAGAACTCTCCGCCTCCCTCACTCAACTCATCCAAAGCCAACAATCATTTCAACTTAATTTTTCAGCAAGCATCAACAACCTCAAAACTGAATTCCATCATCTTCGATCACTTATTCCTCCACCAAATTTCAATTCACCCATCACACCTCATACTCAACAACAAACTACACCACAACCTCGTGAAATTTTCATTCATCAACCTTGTTCACCACTGGGTTTCACTTCACCCTTCACACCAGATCCATGGTTGTATTCACACACACCATTTCCTCAACATCAGCCGAAAAATAGTCCTTCCACCACCACTCATTTCCACCATACCCACTCATCATCTATTAACCACCAACACCACCTTGAGATTTACGATTCTGAAACTGTGGAGAAAGACCTAACAAAATCAACAAATCTTTACCAAACAGAACTGCAACAACCAACTCTAATTATGAAACAACAACCAACTCTAATTATGAAACAAGATGAAGAAAAAAAGTCAGTGGGAGAGGAATCACCACCTGAGCCACCACCGAGAATGATTTCTGATCAACCTCCAGTGTCGTCGCCGCCCTTAAAACCTCAGAACACAGTCTCACATCAATCACCGCCACCCCTGCGATCTCCAAATGTAGTCTCATCTATGTCACCACCGCCGAAAACACCATTGATACCTCCAAACACAGTCTCTTATCAGCCACCACTAGTGAAACACCCTTGGGTTGTTACTACGCGACCAATCTCTCTACCACGTTGGTTCACCGGCGCAAGGGAACTTGACAACCATGACTCTCAGGCCGAAGTGATGGAAATGCAGATTAAGGTCTTCGTATTTATTGGAAATAATAACAACCTTGCAACTCTATCAAAATGCAACAATCCTCCCTATGGAAGAGATTTCTATGGCGGTCAACCTACCGGAAGATTCGGGAACGGTCGAGTTCTATCGGATTTGATAACTGCCTCTTTGGGAGTGAAAGATACATTACCAGCATTCCTTAACCCGGCTTTATCTGATAAAGATCTTCCTACTGGGGTTTGCTTTGCATCCGGAGGTTCCGGGTTTGATGATTTGACAGCAAACTCACAGGGAGGAGTTTTGACAATGGGAGCTCAACTGAACTTTTTCAAACAATACATAGCAAAGTTGAAAGCTGCAGTTGGACCAAAAAAAGCTTCTGAAATCATATCCAAAGCTTTGTTTATAATATCAGCAGGAAACAATGATGTTGCGATCGCTTATTCTTTCACTATTCGAAGAACTATGCATTTCAATGTATATGCTAGTACTTTAGTTACAGCAGGCCAAAATTTCCTCAAGAGTTTATATCAACTGGGAGCACGACATGTGTGGGTTATGAGTACAATACCATTGGGATGCTTGCCTGCAGCTAGAACTCAACTGGGAGGACCATTAAGGTTATGTGTAGATTATGAGAATGGATTAGCACAAAGGTATAACGGCATGTTATCGGCCGGAGTTTCGAGTCTTAAAGCCTCTCTTCCCGATTACGATCTTAAGTTCGTCGATGTCTATACTCCTATGCTAAATATCATACAGAATCCTTTCGCATCAGGGTTTCAAAATGTGTGGAATGGTTGCTGTGGAACTGGAACATTTGAAATGGGGGCTCAATGCAACTTGTTAACGTTCCAATGTCCAAATACTGCAACTTATTTTTTCTGGGATGTTGCTCATCCTACAGAGAGAGCTTATCAACTCACTGTTGCACAAATACTACAGGCTCAAAACTATGATCTTAATAGTTACCATATTTCCAAAGCTCTTCATCCTTTGAATGTATCAAGTCTTAGTTTCAAAAATTAA 1884 0.4156 MFITNGAFIERKAMTPPSPSMEELSASLTQLIQSQQSFQLNFSASINNLKTEFHHLRSLIPPPNFNSPITPHTQQQTTPQPREIFIHQPCSPLGFTSPFTPDPWLYSHTPFPQHQPKNSPSTTTHFHHTHSSSINHQHHLEIYDSETVEKDLTKSTNLYQTELQQPTLIMKQQPTLIMKQDEEKKSVGEESPPEPPPRMISDQPPVSSPPLKPQNTVSHQSPPPLRSPNVVSSMSPPPKTPLIPPNTVSYQPPLVKHPWVVTTRPISLPRWFTGARELDNHDSQAEVMEMQIKVFVFIGNNNNLATLSKCNNPPYGRDFYGGQPTGRFGNGRVLSDLITASLGVKDTLPAFLNPALSDKDLPTGVCFASGGSGFDDLTANSQGGVLTMGAQLNFFKQYIAKLKAAVGPKKASEIISKALFIISAGNNDVAIAYSFTIRRTMHFNVYASTLVTAGQNFLKSLYQLGARHVWVMSTIPLGCLPAARTQLGGPLRLCVDYENGLAQRYNGMLSAGVSSLKASLPDYDLKFVDVYTPMLNIIQNPFASGFQNVWNGCCGTGTFEMGAQCNLLTFQCPNTATYFFWDVAHPTERAYQLTVAQILQAQNYDLNSYHISKALHPLNVSSLSFKN 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05946 627 PANTHER GDSL ESTERASE/LIPASE EXL3 298 597 - -
Vivi4g05946 627 MobiDBLite consensus disorder prediction 212 228 - -
Vivi4g05946 627 MobiDBLite consensus disorder prediction 192 211 - -
Vivi4g05946 627 CDD SGNH_plant_lipase_like 294 601 IPR035669 -
Vivi4g05946 627 SUPERFAMILY SGNH hydrolase 418 600 - -
Vivi4g05946 627 MobiDBLite consensus disorder prediction 111 130 - -
Vivi4g05946 627 Pfam GDSL-like Lipase/Acylhydrolase 300 594 IPR001087 GO:0016788
Vivi4g05946 627 Gene3D SGNH hydrolase 295 604 IPR036514 -
Vivi4g05946 627 MobiDBLite consensus disorder prediction 229 245 - -
Vivi4g05946 627 MobiDBLite consensus disorder prediction 181 245 - -
Vivi4g05946 627 MobiDBLite consensus disorder prediction 106 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05946 Vivi-Chr4 196572920 196576825 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05946 299 600 Pollen Coat Proteome AT1G75910 42.857 1.01e-69 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05946 - - vvo:131596689 1217.22