Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05944 ATGGAGAACATAATGACAATGAGATTGGTCACAATTTTTGTGGTTTTATTTGCCAGAGTATCAAATATTGCAATTGCTGCAAACCCAGCCTATCCTGCAGTGTTTGCATTTGGTGACTCAATCTTTGATACAGGAAATAATAACAACCTTGCAACTCTATCAAAATGCAACAATCCTCCCTATGGAAGAGATTTCTATGGCAGACAGCCAACCGGAAGATTCGGGAACGGCCGAGTTCTGTCAGATTTGATAACTGCGTCTTTGGGAGTGAAAGATACATTACCAGCATTCCTTAACCCGGCTTTATCCGATAAAGATCTTCCTACTGGTGTTTGCTTTGCATCAGGAGGTTCAGGGTTCGATGATTTGACCGCAAACTCGCAGGGAGGAGTTTTGACAATGGGTGCTCAACTGAACTTTTTCGAACAATACATAACAAAGTTGAAAGCATCAGTTGGACCCGAAAAAGCTTCTGAAATCATATCCAAAGCTTTGTTTATAATATCAGCAGGAAACAATGACGTTGCATTCGCTTATTCTTTCACTATTAGAAGAACTATGCTTTTCAATGTATATGCCAGTACTTTAGTTACAGCAGGCCAAAATTTCCTCAAGAGTTTATATCAACTTGGAGCACGACATGTGTGGGTTATGAGTACAATACCATTGGGATGCTTACCTGCAGCTAGAACTCAACTGGGAGGACCATTAAGGTTATGTGTAGATTATGAGAATGGATTAGCACAAATATATAACGGCATGTTATCGGCCGGAGTTTCGAGTCTTAAAGCCTCTCTTCCCGATTATGATCTGAAGTTCGTCGATGTCTATACTCCTATGCTAAATATCATACAGAATCCTTTCGCATCAGGGTTTCAAAATGTGTGGAATGGTTGCTGTGGAACTGGAACATTTGAAATGGGAGCTCAATGCAACTTGTTAACGTTCCAATGTCCAAATACTGCAACTTATTTTTTCTGGGATGTTGCTCATCCTACAGAGAGAGCTTATCAACTCACTGTTGCACAAATACTACAAGCTCAAAACTATGATCTTAATAGTTACCATATTTCCAAAGCTCTTCATCCTTTGAATGTATCAAGTCTTAGTTTTAAAAATTAA 1122 0.3922 MENIMTMRLVTIFVVLFARVSNIAIAANPAYPAVFAFGDSIFDTGNNNNLATLSKCNNPPYGRDFYGRQPTGRFGNGRVLSDLITASLGVKDTLPAFLNPALSDKDLPTGVCFASGGSGFDDLTANSQGGVLTMGAQLNFFEQYITKLKASVGPEKASEIISKALFIISAGNNDVAFAYSFTIRRTMLFNVYASTLVTAGQNFLKSLYQLGARHVWVMSTIPLGCLPAARTQLGGPLRLCVDYENGLAQIYNGMLSAGVSSLKASLPDYDLKFVDVYTPMLNIIQNPFASGFQNVWNGCCGTGTFEMGAQCNLLTFQCPNTATYFFWDVAHPTERAYQLTVAQILQAQNYDLNSYHISKALHPLNVSSLSFKN 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05944 373 CDD SGNH_plant_lipase_like 32 347 IPR035669 -
Vivi4g05944 373 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 34 45 IPR008265 GO:0006629|GO:0016298
Vivi4g05944 373 Pfam GDSL-like Lipase/Acylhydrolase 34 340 IPR001087 GO:0016788
Vivi4g05944 373 PANTHER GDSL ESTERASE/LIPASE EXL3 16 343 - -
Vivi4g05944 373 SUPERFAMILY SGNH hydrolase 36 346 - -
Vivi4g05944 373 Gene3D SGNH hydrolase 19 350 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05944 Vivi-Chr4 196568714 196570196 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05944 10 346 Pollen Coat Proteome AT1G75910 42.690 2.86e-83 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05944 - - vvo:131596689 692.575