Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05942 ATGCAACTCACAAGTTCTCCAATGACTTCTTCATTCTTAATCCATTTCTTTGTATTATTTGCTTTATGCTTCAAAGCAAAGGCTGTGATAAAGCTTCCTCCAAATGTTTCAGTTCCAGCTGTGATAGCATTTGGAGATTCAATCGTTGACTCAGGAAACAACAATCACCTCAAAACTTTGGTCAAATGTAACTTTCCTCCTTATGGTAAAGATTTTCAAGGTGGTGTTCCAACTGGTAGATTTTGCAATGGAAAAATTCCTTCAGATATTCTAGCTGAAGAATTGGGTATCAAAGGGTATGTACCAGCATATTTGGATCCAAATCTCAAACCATCTGATCTTCTTACGGGCGTAGGGTTCGCCTCCGGAGCATCAGGATACGATCCATTAACACCACAAATTGCGTCGGTGATACCGTTATCGTCTCAACTAGACATGTTCAAAGAATACATAGGAAAGCTGAAAGGCATGGTTGGAGAAGAAAGAACAAACTTCATCTTATCCAATAGTCTTTTTGTTTTGGTGGGAGGTAGTGATGACATTGCCAACACATATTTTATTGCCCACGCAAGATTACAATATGATGTTCCTGCTTACGCTGATCTTATGTCCACCTCAGCCACTAATTTTGTAAAGGAAATATATAATCTTGGAGCTAGAAGAATTGCTGTACTAGGTGCACCCCCAATTGGATGTGTGCCATCACAAAGAACTCTTGCTGGAGGGATAGTAAGAGAATGTGCAGAAAAATATAATGATGCAGCAAAGTTATTCAACATCAAACTCTCAAAGGAGCTTGATTCTCTAAGTCACAGCTCACCCAATAGCAGGATAGTTTACATTGATGTTTACACCCCTCTACTTGATATCATTCTCAACTATCAAAAATATGGGTTCAAAGTTGTGGATAGAGGTTGTTGTGGCACAGGGAAATTAGAGGTTGCAGTGTTATGCAATCCGTTTGACACTACTTGTTCTAATGCTTCTGAATATGTGTTTTGGGATAGCTATCATCCTACTGAAAGAGCATATAGAAACCTAGTAGATGGAGTTCTTCAAAAATATTTGAGCAGATTGATATAA 1083 0.385 MQLTSSPMTSSFLIHFFVLFALCFKAKAVIKLPPNVSVPAVIAFGDSIVDSGNNNHLKTLVKCNFPPYGKDFQGGVPTGRFCNGKIPSDILAEELGIKGYVPAYLDPNLKPSDLLTGVGFASGASGYDPLTPQIASVIPLSSQLDMFKEYIGKLKGMVGEERTNFILSNSLFVLVGGSDDIANTYFIAHARLQYDVPAYADLMSTSATNFVKEIYNLGARRIAVLGAPPIGCVPSQRTLAGGIVRECAEKYNDAAKLFNIKLSKELDSLSHSSPNSRIVYIDVYTPLLDIILNYQKYGFKVVDRGCCGTGKLEVAVLCNPFDTTCSNASEYVFWDSYHPTERAYRNLVDGVLQKYLSRLI 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05942 360 Pfam GDSL-like Lipase/Acylhydrolase 41 348 IPR001087 GO:0016788
Vivi4g05942 360 PANTHER GDSL ESTERASE/LIPASE EXL3 20 349 - -
Vivi4g05942 360 SUPERFAMILY SGNH hydrolase 155 355 - -
Vivi4g05942 360 CDD SGNH_plant_lipase_like 39 355 IPR035669 -
Vivi4g05942 360 Gene3D SGNH hydrolase 31 356 IPR036514 -
Vivi4g05942 360 FunFam GDSL esterase/lipase APG 30 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05942 Vivi-Chr4 196548084 196551874 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05942 35 353 Pollen Coat Proteome AT1G75910 40.867 2.68e-75 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05942 - - gmx:100777710 583.178