LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi4g05937	ATGAAGCTCCCTTCTTCTCATTCTTTTCTAACTTTAATTTCCACTATAATTCTCCACTTGATATTTTTCTTTTCTCTTTGCTTTGAAACAAATGCAAAAGTTGAACTCCCTGAAAATGTTTTAATTCCAGCATTGTTTGTGTTTGGAGATTCAATTATGGATACAGGAAATAACAACTTCAAAAAAACAATAACTCGATGCGATTTTGCACCATATGGAAAAGATTTTCCCGGAGGAGTTCCAACCGGTCGATTTAGCAACGGAAAGGCTCCATCTGACATTGTAGCTGAAGAATTAGGCATCAAAGAATTTCTACCTCCATATTTAGATCCCAAACTCAATGCTACTGAATTGGCAACTGGTGTGTGTTTTGCTTCTGGTGGTTCTGGCTTCGATCATGTTACATCAAAATTGTTGAATGCAATACCTTTATCAAGTCAACTAGACTCATTCAAAGAATATATTGAGAAGCTTAAAGTATCTGTTGGAGAAAACAGAACAAATGAAATTTTAGCCAATAGTGTTTTTCTTGTGGTTTTTGGAAGCAATGACATTTCCAACACATATTTCTTAACTCGTTTGAGAAAAATTAAATATCCTGAATTTTCTGATTATGCTGATCTTCTGGTTAGTATAGCTTCCAACTTCACTAAGGAAATATATCAACTAGGGGCTCGGAGAATCGGAATATTTAACGTGCCGCCTCTAGGGTGTGTGCCATTGCAGAGAACGGTGGCCGGAGGATCAGAAAGAAAATGTGTTGAAGAATACAATAATGCAACAGTATTGTTTAATGATAAGTTATCGAATGAGATTGATTCGATTAAAACTAATTTATCAGATAGCAGGATTGTTTATATGGATGTTTACAGTCGTACACTCGATGTCATTGTGAATCGTCAAAATTATGGGTTTGCAAATGAAGACAAAGGGTGTTGTGGCACTGGAAAATTAGAGGTTGGATTTTTGTGCAACCGTCTTGGATCTATATGTTCCAATGTTTCAGAACATGTGTTTTGGGACAGTTTTCATCCCACTGAAATCTTTTACAAAATCACTATACCCCCTCTACTAAAAAATTATATGAGCCAATTTCTTTGA	1101	0.3551	MKLPSSHSFLTLISTIILHLIFFFSLCFETNAKVELPENVLIPALFVFGDSIMDTGNNNFKKTITRCDFAPYGKDFPGGVPTGRFSNGKAPSDIVAEELGIKEFLPPYLDPKLNATELATGVCFASGGSGFDHVTSKLLNAIPLSSQLDSFKEYIEKLKVSVGENRTNEILANSVFLVVFGSNDISNTYFLTRLRKIKYPEFSDYADLLVSIASNFTKEIYQLGARRIGIFNVPPLGCVPLQRTVAGGSERKCVEEYNNATVLFNDKLSNEIDSIKTNLSDSRIVYMDVYSRTLDVIVNRQNYGFANEDKGCCGTGKLEVGFLCNRLGSICSNVSEHVFWDSFHPTEIFYKITIPPLLKNYMSQFL	366

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi4g05937	366	ProSitePatterns	Lipolytic enzymes "G-D-S-L" family, serine active site.	45	56	IPR008265	GO:0006629\|GO:0016298
	Vivi4g05937	366	Gene3D	SGNH hydrolase	34	359	IPR036514	-
	Vivi4g05937	366	CDD	SGNH_plant_lipase_like	43	352	IPR035669	-
	Vivi4g05937	366	FunFam	GDSL esterase/lipase APG	34	362	-	-
	Vivi4g05937	366	Pfam	GDSL-like Lipase/Acylhydrolase	45	352	IPR001087	GO:0016788
	Vivi4g05937	366	PANTHER	GDSL ESTERASE/LIPASE EXL3	24	354	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi4g05937	Vivi-Chr4	196507749	196509466	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi4g05937	12	360	Pollen Coat Proteome	AT1G75910	39.773	1.03e-74	233

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi4g05937	-		-	gmx:100777186	447.203

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