Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05937 ATGAAGCTCCCTTCTTCTCATTCTTTTCTAACTTTAATTTCCACTATAATTCTCCACTTGATATTTTTCTTTTCTCTTTGCTTTGAAACAAATGCAAAAGTTGAACTCCCTGAAAATGTTTTAATTCCAGCATTGTTTGTGTTTGGAGATTCAATTATGGATACAGGAAATAACAACTTCAAAAAAACAATAACTCGATGCGATTTTGCACCATATGGAAAAGATTTTCCCGGAGGAGTTCCAACCGGTCGATTTAGCAACGGAAAGGCTCCATCTGACATTGTAGCTGAAGAATTAGGCATCAAAGAATTTCTACCTCCATATTTAGATCCCAAACTCAATGCTACTGAATTGGCAACTGGTGTGTGTTTTGCTTCTGGTGGTTCTGGCTTCGATCATGTTACATCAAAATTGTTGAATGCAATACCTTTATCAAGTCAACTAGACTCATTCAAAGAATATATTGAGAAGCTTAAAGTATCTGTTGGAGAAAACAGAACAAATGAAATTTTAGCCAATAGTGTTTTTCTTGTGGTTTTTGGAAGCAATGACATTTCCAACACATATTTCTTAACTCGTTTGAGAAAAATTAAATATCCTGAATTTTCTGATTATGCTGATCTTCTGGTTAGTATAGCTTCCAACTTCACTAAGGAAATATATCAACTAGGGGCTCGGAGAATCGGAATATTTAACGTGCCGCCTCTAGGGTGTGTGCCATTGCAGAGAACGGTGGCCGGAGGATCAGAAAGAAAATGTGTTGAAGAATACAATAATGCAACAGTATTGTTTAATGATAAGTTATCGAATGAGATTGATTCGATTAAAACTAATTTATCAGATAGCAGGATTGTTTATATGGATGTTTACAGTCGTACACTCGATGTCATTGTGAATCGTCAAAATTATGGGTTTGCAAATGAAGACAAAGGGTGTTGTGGCACTGGAAAATTAGAGGTTGGATTTTTGTGCAACCGTCTTGGATCTATATGTTCCAATGTTTCAGAACATGTGTTTTGGGACAGTTTTCATCCCACTGAAATCTTTTACAAAATCACTATACCCCCTCTACTAAAAAATTATATGAGCCAATTTCTTTGA 1101 0.3551 MKLPSSHSFLTLISTIILHLIFFFSLCFETNAKVELPENVLIPALFVFGDSIMDTGNNNFKKTITRCDFAPYGKDFPGGVPTGRFSNGKAPSDIVAEELGIKEFLPPYLDPKLNATELATGVCFASGGSGFDHVTSKLLNAIPLSSQLDSFKEYIEKLKVSVGENRTNEILANSVFLVVFGSNDISNTYFLTRLRKIKYPEFSDYADLLVSIASNFTKEIYQLGARRIGIFNVPPLGCVPLQRTVAGGSERKCVEEYNNATVLFNDKLSNEIDSIKTNLSDSRIVYMDVYSRTLDVIVNRQNYGFANEDKGCCGTGKLEVGFLCNRLGSICSNVSEHVFWDSFHPTEIFYKITIPPLLKNYMSQFL 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05937 366 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 45 56 IPR008265 GO:0006629|GO:0016298
Vivi4g05937 366 Gene3D SGNH hydrolase 34 359 IPR036514 -
Vivi4g05937 366 CDD SGNH_plant_lipase_like 43 352 IPR035669 -
Vivi4g05937 366 FunFam GDSL esterase/lipase APG 34 362 - -
Vivi4g05937 366 Pfam GDSL-like Lipase/Acylhydrolase 45 352 IPR001087 GO:0016788
Vivi4g05937 366 PANTHER GDSL ESTERASE/LIPASE EXL3 24 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05937 Vivi-Chr4 196507749 196509466 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05937 12 360 Pollen Coat Proteome AT1G75910 39.773 1.03e-74 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05937 - - gmx:100777186 447.203