Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05936 ATGAAGTTCCCAACACATTCTTATCTATTTTCCACTACATTTCTTCGTTTGACAATATTTTTAGTTGTTTTGTTCAAAACAAAGGCTGTTTTGAAACTGCCGCCAAATGTTTCGATTCCAGCTGTGTTTGTGTTTGGTGATTCAATCATGGATACTGGAAATAACAACAATATGTCAACACCGTCTCGGTGCAATTACCCTCCTTATGGAAGAGATTTTAAAGGAGGAATTCCATCCGGAAGATTTAGCAACGGAAAAGTTCCGTCCGATTTTATAGCTTCAGAATTAGGAATAAAAGAGTATCTACCAGCATATTTGGATCCAACTCTGCAGCCTAGTGAATTGCACACAGGTGTGAACTTTGCATCTGGTGGTGCAGGATATGATCCTATGACATCAAAATTAGAGGTAGCTATATCCATGTCTGGACAACTAGACTTGTTCAAAGATTACATTGTGAGACTTAAAAGACTTGTTGGTGAAGATAGAACAAATTTCATCTTAGCCAATAGTCTCTTTTTTGTGGTATTAGGAAGCAATGATATTTCTAACACATACTATTTGTCTCATATGAGACAAGTGGAATATGATTTTCCTACATACTCTGACTTCTTAGTCAACTCGGCTTATAACTTCTACAAGGAAATGTATGAACTAGGTGCAAGGAGAATTGGAGTATTTAATGCACCACCAATGGGGTGTGTGCCATTTCAAAGAACAATGGCAGGAGGAATACAAAGAAAATGTGTGAAAGAATACAATGATGCATCTGTGCTCTTTAACAACAAGTTGTCACTTGGGATTGATTCTTTTAACCACAACTTTCCAAGTAGCAGAGTTGTTTACATGGATGTTTACAGCCCTCTACTTGAAATCATTCTAAACAATCAACAATATGGATATGGAGTGGGAGACAAAGGATGTTGTGGCACAGGAACAATAGAAGTTACTTATTTATGTAATAGTTTGGATGTCACATGTTCCAATGATTTGGATTATGTGTTTTGGGACAGTTTTCACCCAACTGAATCTGTTTACAAAAAACTTGTTCCCCCTATTCTCCTCAAATACTTGCACAAGTTTATTTAG 1089 0.3664 MKFPTHSYLFSTTFLRLTIFLVVLFKTKAVLKLPPNVSIPAVFVFGDSIMDTGNNNNMSTPSRCNYPPYGRDFKGGIPSGRFSNGKVPSDFIASELGIKEYLPAYLDPTLQPSELHTGVNFASGGAGYDPMTSKLEVAISMSGQLDLFKDYIVRLKRLVGEDRTNFILANSLFFVVLGSNDISNTYYLSHMRQVEYDFPTYSDFLVNSAYNFYKEMYELGARRIGVFNAPPMGCVPFQRTMAGGIQRKCVKEYNDASVLFNNKLSLGIDSFNHNFPSSRVVYMDVYSPLLEIILNNQQYGYGVGDKGCCGTGTIEVTYLCNSLDVTCSNDLDYVFWDSFHPTESVYKKLVPPILLKYLHKFI 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05936 362 CDD SGNH_plant_lipase_like 40 347 IPR035669 -
Vivi4g05936 362 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 42 53 IPR008265 GO:0006629|GO:0016298
Vivi4g05936 362 Gene3D SGNH hydrolase 32 354 IPR036514 -
Vivi4g05936 362 PANTHER GDSL ESTERASE/LIPASE EXL3 22 350 - -
Vivi4g05936 362 Pfam GDSL-like Lipase/Acylhydrolase 42 349 IPR001087 GO:0016788
Vivi4g05936 362 FunFam GDSL esterase/lipase APG 31 358 - -
Vivi4g05936 362 SUPERFAMILY SGNH hydrolase 41 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05936 Vivi-Chr4 196497346 196500145 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05936 9 353 Pollen Coat Proteome AT1G75910 38.920 2.48e-68 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05936 - - gmx:100786548 528.865