Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05935 ATGGTTCCTTTTATGAATTCTCTTTCTTCTTCTCCTCTTCAAAAGTTTCTTCTTTTGTTACTTTTCCGTTTCATAATAATATTAATTGTTGTTTCATGCAAAACAAAAGGTGTGGTGAAACTGCCACCAAATGTTTCAATTCCAGCAGTGTTGGTGTTTGGAGATTCAATAATGGATACAGGAAACAATAATAACAATTTGAGAACAACTGCTCGTTGCAATTTCCCACCTTATGGAAAAGATTTTGAGGGAGGGATTCCTACTGGCAGATTTAGCAATGGAAAAGTTCCCTCTGACTTCATAGTTGAAGAATTAGGCATTAAAGAGCTTCTACCAGCCTACTTGGATCCAAATCTCCAGCCTGATGATTTGCCTACTGGTGTTTGCTTTGCTTCTGGTGGTGCTGGATTTGATCCGTTGACATCTCAAACTGCATCAGCAATATCTTTATCTGGTCAACTAGACTTGTTCAAAGAATACATAACAAAATTAGAAGTACTTGTTGGAGAAGACAGAACAAATTTCATCTTGGCAAATAGTCTTTTCCTTGTGGTATTGGGCAGTAATGACATTTCCAACACATATTTCTTATCCCGTATTCGACAAGTTCAATATGATTTTCCAGACTACGCTGATTTTATGGTCAATTCAGCTTCTAATTTTGTAAAGGAAATATATGAACTAGGTGCAAGGAGGATTGGAGTATTCAATGTACCACCAATTGGTTGTTTACCATTTCAGAGAACAGCAGCTGGAGGAATAGAAAGAAAAATTGTAGTAAAGTACAATGAAGCAGTAGAATTATACAACAATAAATTGTCAAAGGGGTTAGCTTCTTTTAATCAGAACTATCCAAATAGCAGGACTGTTTGCATTGATGTCTATAACCCTTTGCTTGACATCATATTAAACTCCAATAAATATGGATATAAAGTGGAAGATAGAGGATGTTGTGGCACAGGTATAATAGAGGTAGTATTCTTATGCAATCATTTGGCTTCAACTTGTCCCAATGATATGGAATTTGTATTTTGGGATAGTTTTCATCCAACTCAAAGTGTTTACAAACGCCTCATACCTCCAATTATTGGAAGATATGTCAAAGATTTCATGTGA 1116 0.3566 MVPFMNSLSSSPLQKFLLLLLFRFIIILIVVSCKTKGVVKLPPNVSIPAVLVFGDSIMDTGNNNNNLRTTARCNFPPYGKDFEGGIPTGRFSNGKVPSDFIVEELGIKELLPAYLDPNLQPDDLPTGVCFASGGAGFDPLTSQTASAISLSGQLDLFKEYITKLEVLVGEDRTNFILANSLFLVVLGSNDISNTYFLSRIRQVQYDFPDYADFMVNSASNFVKEIYELGARRIGVFNVPPIGCLPFQRTAAGGIERKIVVKYNEAVELYNNKLSKGLASFNQNYPNSRTVCIDVYNPLLDIILNSNKYGYKVEDRGCCGTGIIEVVFLCNHLASTCPNDMEFVFWDSFHPTQSVYKRLIPPIIGRYVKDFM 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05935 371 SUPERFAMILY SGNH hydrolase 50 365 - -
Vivi4g05935 371 Pfam GDSL-like Lipase/Acylhydrolase 50 358 IPR001087 GO:0016788
Vivi4g05935 371 Gene3D SGNH hydrolase 41 363 IPR036514 -
Vivi4g05935 371 CDD SGNH_plant_lipase_like 48 358 IPR035669 -
Vivi4g05935 371 FunFam GDSL esterase/lipase APG 39 367 - -
Vivi4g05935 371 PANTHER GDSL ESTERASE/LIPASE EXL3 26 359 - -
Vivi4g05935 371 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 50 61 IPR008265 GO:0006629|GO:0016298
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05935 Vivi-Chr4 196462214 196470149 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05935 44 363 Pollen Coat Proteome AT1G75910 40.308 2.74e-72 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05935 - - gmx:100776769 551.592