Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05912 ATGTCTGTTTCTGTTACCGTCACCTCCGCCGTGGGACCCTTTCTTTCCCGATCCCGCCGGCGGCCAACGACGGCCCTCCGATCCAGCAAGGTTTCAGTCCAACAAACAAGATTATTAACGAAACTGAAACAAGAGTGTGCCACTCCTCTCCCCCTTCTTCAGCATGTGGCCGATACCATGTCTTCTGAAATGCAGGCCGGGCTTTCCTCCGAAGACGGGCCCGGGCTTCCCATGATACCTACTTATGTCCACACTCTTCCCACCGGGAATGAGAAAGGATTGTTTTATGCATTGGATCTTGGTGGAACAAACTTTCGTGTCTTGAGAGTAGAATTAGGTGGCAAAGATGATCGTGTTGTTTCCACTCAGTTTGAACAGGTTTCTATACCTCATGACCTCATGTCAGCTACATCCGAGGAGCTATTTGACTTCATTGCTTTGGGGCTAGCTAAGTTTGTGGCAAAAGAGGATGGTAAATTTCATTTTCCACCAGGAAGAAAGAGAGAGATTGGATTCACATTTTCATTTCCTGTGAAACAAACTTCTATTGATTCTGGCATACTAATCAAGTGGACTAAGGGTTTTGCTGTCTCTGGAACTGTGGGAAGAGATGTGGTTGTTTGTTTGAATGAGGCTATCGAAAGACAAGGACTAGATATGCGAGTTTCTGCTCTGGTTAATGATACTGTTGGAACACTAGCTGGAGCAGAGTACTATGATAATGATGTTAAGGTTGCTGTTATTTTGGGTACTGGAACCAATGCTTGTTACGTCGAGCAGATAAGTTCCATTCCAAAATTACAAGGCCATGTTTCTTCTTCTGGTAAAATGATCATTAGTACTGAGTGGGGGGCTTTCTTCAAAGGTCTGCCTTTAACCGTGTTTGATAGAGAAATGGATGCCGCTAGCATCAATCCCGGTCAGCAGATCTTTGAGAAGACAATCTCAGGAATGTATTTAGGAGAAATTGCGAGACGAGTGCTACTCAGTATGGCTGAAGAGGATGGTTTGTTTGGAAGTTCTGTCTCTCCAAAACTATCTATGCCGTTCATACTCGGGTTGAGTCCAATCTAA 1074 0.4479 MSVSVTVTSAVGPFLSRSRRRPTTALRSSKVSVQQTRLLTKLKQECATPLPLLQHVADTMSSEMQAGLSSEDGPGLPMIPTYVHTLPTGNEKGLFYALDLGGTNFRVLRVELGGKDDRVVSTQFEQVSIPHDLMSATSEELFDFIALGLAKFVAKEDGKFHFPPGRKREIGFTFSFPVKQTSIDSGILIKWTKGFAVSGTVGRDVVVCLNEAIERQGLDMRVSALVNDTVGTLAGAEYYDNDVKVAVILGTGTNACYVEQISSIPKLQGHVSSSGKMIISTEWGAFFKGLPLTVFDREMDAASINPGQQIFEKTISGMYLGEIARRVLLSMAEEDGLFGSSVSPKLSMPFILGLSPI 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05912 357 FunFam Phosphotransferase 81 249 - -
Vivi4g05912 357 PRINTS Hexokinase family signature 170 195 - -
Vivi4g05912 357 PRINTS Hexokinase family signature 245 259 - -
Vivi4g05912 357 PRINTS Hexokinase family signature 96 112 - -
Vivi4g05912 357 PRINTS Hexokinase family signature 222 238 - -
Vivi4g05912 357 PRINTS Hexokinase family signature 309 331 - -
Vivi4g05912 357 ProSiteProfiles Hexokinase domain profile. 33 357 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Vivi4g05912 357 Pfam Hexokinase 244 352 IPR022673 GO:0005524|GO:0005975|GO:0016773
Vivi4g05912 357 PANTHER HEXOKINASE 29 352 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Vivi4g05912 357 CDD NBD_sugar-kinase_HSP70_actin 97 259 - -
Vivi4g05912 357 Gene3D - 90 227 - -
Vivi4g05912 357 Gene3D - 32 89 - -
Vivi4g05912 357 ProSitePatterns Hexokinase domain signature. 170 195 IPR019807 GO:0004396|GO:0005524|GO:0006096
Vivi4g05912 357 Pfam Hexokinase 40 238 IPR022672 GO:0005524|GO:0005975|GO:0016773
Vivi4g05912 357 Gene3D - 228 356 - -
Vivi4g05912 357 SUPERFAMILY Actin-like ATPase domain 30 240 IPR043129 -
Vivi4g05912 357 SUPERFAMILY Actin-like ATPase domain 242 353 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05912 Vivi-Chr4 196042856 196045254 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05912 K00844 - gmx:100817266 559.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05912 4 196042856 196045254 Vivi4g05912 4 196042856 196045254 ECH