Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05907 ATGTCTTCAACTCAAAACAATAACAAATCGAGTTCCAGAATCACATGGGAAGGTTGCAGCGTCTTGCTTGATATCAACGACGGCGACCGTCTCGTCTTCGCTCGTCTTTCCCCTGCAGCGAAATTGAAGATTGGTAATAAGAATTGTTCGTTGCAGCCTTTGATTGGTTGTCCCTTTGGTACTGTTTTTCAACTTGACACTTCTTCTGATGGCCCTTTTCTATCGCCATTCCAACCCAAAGGTGATGTAAATAACACCGACGAAATAAAAGATGGTCATGATCAACCCAACAGTGATTCCAAGGACAACCGGTCGTTGATCGACAATAATACTGCACAAAGCCTCACTGGTGAAGATATAGAAGACATGCGAAGACAGGGTGCTAAGGGTAATGAAATAATTGAAGCTCTCATTGCCAATAGTGCAACATTTGATAAGAAAACATCATTCTCACAGGAGAAATATAGACTTAAGAAGCAGAAGAAATATGCACCAAGGGTACTTATAAGGCGTCCTGTTGCTCGAAGCATATGTGAGGCCTATTTCAAGAAGTATCCATTAAAAATTGGGTTCTTGAGGGTGGATACATTGTCCCTTCTACTTTCAATGGCTAATGTTTCTTCTAATTCTGACATTCTTGTCGTTGATATGGTTGGTGGCCTTCTTACTGGTGCCGTGGCAGAACGTTTAGGAGGCACCGGTTTTGTCTGTAACTCATATCTTGGACAGACACCACCTTCCATGGATATTGTGAGGATATTTAATTTAAGCGATGAAATCTGCAAGAGAATTGTAAGGTCTTCCATATCTGATTTGTTGTCGCCAAAGGAATCACCTCAACAAAACCCGAAACAAGATGTCGGCAGCGTGGAAAGCCAATCAATTGATCAAATGAGTGTATCGGTCAACATGGAAGAAGTCTCTCATTCACCAGAAAATGGAATTTCTGATCTTGGTGCTGAAAATACCACATTTCCTGTTCTAAAAGCTCACAAAGCTATCAAGGCTGGAGAAAAGGCGTCTCAAGAGATCCTTGACTCATGGAAAGAAAATGGTTTTTCTAGCTTAATTATTGCTGCACCAGACTTGGATACTTGGACAGTGGTTAGAGACCTCTTACCACTTTTATCAAACTCTGCTCCATTTGCTATTTATCACCAATATCTTCAGCCTCTAGCTACTTGCATGCACAATCTGCAGCTTGAGAAAATGGCCATTGGATTGCAAATAACAGAGCCGTGGCTTCGTGAATACCAGGTACTTCCATCAAGAACTCACCCACATATGCAAATGAGTGCATTTGGAGGTTACATTCTCAGTGGGACAAAGATCTGCAGCAGCTGA 1344 0.4182 MSSTQNNNKSSSRITWEGCSVLLDINDGDRLVFARLSPAAKLKIGNKNCSLQPLIGCPFGTVFQLDTSSDGPFLSPFQPKGDVNNTDEIKDGHDQPNSDSKDNRSLIDNNTAQSLTGEDIEDMRRQGAKGNEIIEALIANSATFDKKTSFSQEKYRLKKQKKYAPRVLIRRPVARSICEAYFKKYPLKIGFLRVDTLSLLLSMANVSSNSDILVVDMVGGLLTGAVAERLGGTGFVCNSYLGQTPPSMDIVRIFNLSDEICKRIVRSSISDLLSPKESPQQNPKQDVGSVESQSIDQMSVSVNMEEVSHSPENGISDLGAENTTFPVLKAHKAIKAGEKASQEILDSWKENGFSSLIIAAPDLDTWTVVRDLLPLLSNSAPFAIYHQYLQPLATCMHNLQLEKMAIGLQITEPWLREYQVLPSRTHPHMQMSAFGGYILSGTKICSS 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05907 447 PANTHER TRANSLATION INITIATION FACTOR EIF3-RELATED 1 447 IPR017423 GO:0030488|GO:0031515
Vivi4g05907 447 PIRSF TRM6 4 447 IPR017423 GO:0030488|GO:0031515
Vivi4g05907 447 MobiDBLite consensus disorder prediction 84 101 - -
Vivi4g05907 447 MobiDBLite consensus disorder prediction 272 292 - -
Vivi4g05907 447 Pfam Gcd10p family 20 286 IPR017423 GO:0030488|GO:0031515
Vivi4g05907 447 MobiDBLite consensus disorder prediction 102 117 - -
Vivi4g05907 447 MobiDBLite consensus disorder prediction 73 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05907 Vivi-Chr4 195987287 195992314 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05907 K03256 - gmx:100783601 704.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05907 4 195987287 195992314 Vivi4g05907 4 195987287 195992314 ECH