Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05904 ATGGTGTTGAAAAACCTAGATGTAACACTGAAAATCCTTCAATCAGTACTTGATGATGCTGAAGAGAATCAGATCACTAATCCTGCGGTCAAGAAGTGGCTGAATATGCTGCATGATGTTGTCTATGAAGCTGAAGATTTGATCGACGAAATCAATACTGAGCATTTAAGGCGCAGAGTTGAAGCTGATCAGGTTCTTCAAAAGTTTTCTTCTTTTTTAAAAAGGTTTAATAAAGATATCAATTCTAAAGTGCCAAAGTTATTTGAAAAACTGCAACATTTGGGAATACAAAATCCTGGATTGAAAAAAGATAATTCCAACAGTGTTTGGAATGTAACTCCTACAAATTCTGTTGTGGAAGATGAATCTGCTATTTATGGCAGAGATGATGAAAGAAAGATACTTAAAGAGCTTCTGCTGTCGGAGGATGGTGGAAGTAAAATAGGAGTGATTTTCATTGTGGGTATGGGAGGATTAGGAAAAACAACACTGGCAAAACTCCTTTACAACGACCATGATGTTAGACATAAATTTATGGTGAGTGGGTGGGCACATATTCCACCGGATCTTGATATTTTCACCGTCACTAAAACCATTCTTGAGTCTCTCACGTCAAAAAGATATGAGACGGATGGCCTCAAGATTCTACGGGCGCAATTGCAACAAACCTTATCGGCTAAAAAGTTTTTGCTAGTGTTGGATGATATATGGTATGGAAGATATGTTGGTTGGAATAATCTCAATGATATTTTTAATCATGCGAAAGTAGGGAATATTTGGTCTTTACTAGCAAGACATGCATTTGTAGAAGGAAACTACCAACAACATCCTAGTCTAGAAATAATTGGTACCGAAATTGCCAAAAGATGCGGTGGCTTACCATTAGCTGCAGTAGAATTGGGGGGTATTCTTCGCACCAAATTGTCAGAAAATGATTGGAGTGATGTATTAAACAATTGTATGTGGGAGTTGACAAATGATAAGGGGCAGCCAACTCTGCTATCGAGCTATCAATATCTTCCGGGTCCTTTAAAAAGATGTTTTGCTTATTGTTCAATTTTTCCAAAGAACTCAATCTTAGAAAAAAATATGTTGGTTCAGTTATGGATTGCAGAAGGCCTAATACCTTATCCCAAAGGTCAGAAAACTTGGGAAGAAGTAGCAGAAGAATACTTTGATAAACTAGTGTCAATGTCTCTGATACATCAATGTTCCAATGATGATGACAAAAGAAACTTTGAAATGCATGAACTCATCCATGATTTGGCTATGACAGTTTCATTTCCACATTGCTTTAGGTTGGACAAATATAGGCCGGATAAAAGGGTGCGACCTTTGTCATACAACAGAGAGGAATACGATAAATTTGATGAATTGCATGAATTAAAAGGTCTACGGACACTTTTAGCCCTGCCATTGCAAGATTCACCGGTGTCTTACTATTCAGTGTCGATTAAGTTACTTTTTGATTTGTTGTCAACAGAGACACACTTGCACGTGTTGTCTCTTTCACACTACCAAAATATCACTAAGTTGCCCAACTCTATTGGAACTTTAATATACCTGCGATACTTGAATCTCTCTGGCACTCAGATTAAAAGATTGTCTTATGAAATATGCAAGCTTTACAATTTACAGACGTTGTTGTTGTCAAAATGTTGGGAACTCATTGAATTACCAAAGGACATAGGGAAATTGGTGAATCTACGTCACCTTGACATTAGAGGTACTAAACTGAAGGAAATGCCTGTACAAATATCCACACTAGAAAACCTACGGACATTGTCAGACTTTATAGTCAGCGTTAAGGATGTCGGATTAAAGATCGGAGATCTGGGAAAATATCCTTATCTACGGGGAGGCCTTTCCATCTCACAACTTGAAAATGTAACTGACCCATTCCATGCCTTTGAAGCAAATTTGAAGTTGAAAAGAGAAGTTGACGACTTGGAACTTAGATGGTCTTACACTGCTCCTTTAAACTCACAAATACAAAGTGCTGTATTGGAAAAACTGATTCCGTCGACAGATTTGAAGGGTCTGATCATCTCCGGATATGGTGGAGACAAATTACCAAATTGGTTGGGCTATTCTATATTTAGCAACATGGTGAGATTGAGTATCTTAGAGTGTAGAAATTGTTCAGGGTTGCCATCCCTCGGAAAACTAGGAAATCTAAAAGAACTTTTTATTAGTAAGATGCAATCAGTTAAGAGTGTTGATATTGAGTTCTTTGGACGCGGGTCTCCTTCTTTTCAACCATTTCTCTCCTTGAAGACTCTGCGCTTTGACCATATGGACGAGTGGGAGGAATGGGAGCTAATTGGAGGTTCATCTCCAGAGTTTCCTAGTCTAACACACCTGTCTTTGGAATATTGTCCGAAACTCACAGGAACCATACCATGCGACCTTCCTAGGCTTACATATCTGTCTATGAATCTTTGTCCTGAACTCAGAGGGATGACACTCCACAACCTTCCTTCCCTTACTGAACTTGAGTTAACTGAGTGTCCTCTACTGATGGAGACAAGCCCTCCATTTGACGTATTCAGCCAGTTGACGATTTGTCTCAGTTCTCTTCAAAAATTGACTTTAAAAAACATTCCTTCTCTAACATCCTTTCCAAATGACGGTCTTCCCAAACCCTTACGTTCTCTCCATATCGATTACTGTGAGAATCTGGAGTTCATTTCTCATGAATCTTTTCACAATTACTCATCACTCGAGCATTTGACTATATCCAATAGTTGTAATCCAATGACTTCATTTACCTTGTGCTCTCTCCCAGTCCTCCAAAGTCTATATATTGGTGGCTGTAAACATTTAAAATCCGTATTAATTGCAGAAGATGAGTCACAGCAGAAACTCTTGTTTCTTAGAACCATCACAATAGAGTTTTGCAATGAACTAGAGTCGGTTTCCCTAAGTGGATTTCCCATTCCTAACCTCACTCATTTAACTGTGCGTCAGTGTGAGAAGCTTTATGCTCTACCTAGACCAATGAACAAACTAGAGAGCCTTCATAAGTTAAAAATTGATGGTCTTCCAAATCTGAAACCAGTTTCCAGAGATGAGTTGCCTCTCAGTTTACTTGTACTTCATGGATAA 3108 0.3845 MVLKNLDVTLKILQSVLDDAEENQITNPAVKKWLNMLHDVVYEAEDLIDEINTEHLRRRVEADQVLQKFSSFLKRFNKDINSKVPKLFEKLQHLGIQNPGLKKDNSNSVWNVTPTNSVVEDESAIYGRDDERKILKELLLSEDGGSKIGVIFIVGMGGLGKTTLAKLLYNDHDVRHKFMVSGWAHIPPDLDIFTVTKTILESLTSKRYETDGLKILRAQLQQTLSAKKFLLVLDDIWYGRYVGWNNLNDIFNHAKVGNIWSLLARHAFVEGNYQQHPSLEIIGTEIAKRCGGLPLAAVELGGILRTKLSENDWSDVLNNCMWELTNDKGQPTLLSSYQYLPGPLKRCFAYCSIFPKNSILEKNMLVQLWIAEGLIPYPKGQKTWEEVAEEYFDKLVSMSLIHQCSNDDDKRNFEMHELIHDLAMTVSFPHCFRLDKYRPDKRVRPLSYNREEYDKFDELHELKGLRTLLALPLQDSPVSYYSVSIKLLFDLLSTETHLHVLSLSHYQNITKLPNSIGTLIYLRYLNLSGTQIKRLSYEICKLYNLQTLLLSKCWELIELPKDIGKLVNLRHLDIRGTKLKEMPVQISTLENLRTLSDFIVSVKDVGLKIGDLGKYPYLRGGLSISQLENVTDPFHAFEANLKLKREVDDLELRWSYTAPLNSQIQSAVLEKLIPSTDLKGLIISGYGGDKLPNWLGYSIFSNMVRLSILECRNCSGLPSLGKLGNLKELFISKMQSVKSVDIEFFGRGSPSFQPFLSLKTLRFDHMDEWEEWELIGGSSPEFPSLTHLSLEYCPKLTGTIPCDLPRLTYLSMNLCPELRGMTLHNLPSLTELELTECPLLMETSPPFDVFSQLTICLSSLQKLTLKNIPSLTSFPNDGLPKPLRSLHIDYCENLEFISHESFHNYSSLEHLTISNSCNPMTSFTLCSLPVLQSLYIGGCKHLKSVLIAEDESQQKLLFLRTITIEFCNELESVSLSGFPIPNLTHLTVRQCEKLYALPRPMNKLESLHKLKIDGLPNLKPVSRDELPLSLLVLHG 1035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05904 1035 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 108 351 IPR027417 -
Vivi4g05904 1035 PANTHER DISEASE RESISTANCE PROTEIN RP 32 774 IPR044974 GO:0006952
Vivi4g05904 1035 Gene3D Ribonuclease Inhibitor 877 1032 IPR032675 -
Vivi4g05904 1035 Pfam NB-ARC domain 140 251 IPR002182 GO:0043531
Vivi4g05904 1035 Pfam NB-ARC domain 259 325 IPR002182 GO:0043531
Vivi4g05904 1035 Pfam Rx N-terminal domain 3 65 IPR041118 -
Vivi4g05904 1035 Gene3D Ribonuclease Inhibitor 459 853 IPR032675 -
Vivi4g05904 1035 Gene3D - 2 86 - -
Vivi4g05904 1035 Gene3D - 258 336 IPR042197 -
Vivi4g05904 1035 Gene3D - 337 425 IPR036388 -
Vivi4g05904 1035 SUPERFAMILY L domain-like 415 844 - -
Vivi4g05904 1035 SUPERFAMILY RNI-like 751 1020 - -
Vivi4g05904 1035 PRINTS Disease resistance protein signature 150 165 - -
Vivi4g05904 1035 PRINTS Disease resistance protein signature 223 237 - -
Vivi4g05904 1035 PRINTS Disease resistance protein signature 824 840 - -
Vivi4g05904 1035 Coils Coil 3 23 - -
Vivi4g05904 1035 Gene3D - 107 257 IPR027417 -
Vivi4g05904 1035 FunFam Probable disease resistance protein At1g63360 337 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05904 Vivi-Chr4 195969910 195975369 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05904 509 595 WRKY Transcription Factor Family AT4G12020 38.636 2.64e-06 50.1