Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05888 ATGGGTTCAGTTTCTCTGAAAATTGGTGATGGAACAGCAAGATTCAAAAGAGCTTCGCTTTGTTCTTCAGCTGTTAACATTCTCATGATTTTCTGTGTCATCACAACCAATCTCTTTGCTCTCTATGCTTTCACTTCATCTTCTTCCTCAAAAAACCACACCAACAACAACAGCAACAACGTTATTCACAACAAAAACATCTCTCTTGTCTCAGAACAAGTCTCACTCATTCTCAGAGAGATTGATCTGTCTCAGAAGAAATTAGCCCAGATGGAAAAACAGCTTCTTGGTTATGAAAGATTTGATCTTTCAAGACCCAACATTGCAAATGAGCTCAAAATCTTCCTCCAACGCCATCAACTTCCTCTAGGTAAAGATTCAAGAACTGGGATCACTGAAATGGTTGCATCTGTTGGTCATTCTTGTGAGAAAAACTCAGACTTGTTGTCTCAGTTCATGAGATACAAACTCTCTGCAACTTGTCCTGATGATTGGAGTTTAGCTCAGAAGCTGATCTTAAAAGGGTGTGAGCCATTGCCAAGAAGAAGGTGTTTTTCTAAAACTGTTTCAAAATTAGGGTTTTTTCCTTTACCTGTTTCTCTATGGAAGCCTTTTGGTAATGGTAATAACACTTTCAATTGGAGTGGTTTGAAAGGTAAGAAATTGAGTAGAGATTGTGTTAATTGTTTTGATTTGGCTAGTGGTGGAAATGAGAATCAAAGGTTTTTGAAGGGTAAGAGTAAAAATGATTTTTTGATTGATGATGTTTTAGGTTTAGGAAATGGTGGAATTAGGGTAGGGTTTGATATTGGTGGTGGTTCTGGTTCTTTTGCTGCTAGAATGTTTGATAGAAATGTTACTGTGATTACTAATACTCTTAATGTTGATGCACCGTTTAGCGAATTCATTGCAGCAAGAGGACTTTTTCCGATTTACTTGAGCTTAGATCATAGGTTTCCGTTTTACGACAATGTGTTTGATTTGATTCATGCTTCGAGTGCATTGGATGTTGTTGGAGGGAAGTCGGAGAAGTTGGAGTTTTTGATGTTTGATATTGATCGAGTTTTGAGGGCCGGTGGTTTGTTTTGGCTTGATAATTTCTTCTGTGATAGCGAAGAGAAGAAACAAACTCTTACAAGGTTGATTGAAAGGTTTGGTTATAAGAAATTGAAATGGGTTGTGGGAGAGAAGGTTGATAGTTTTGGATCGGGTAAACCCGTAGTCGTGTTGTCTGCGGTTCTTCAGAAACCGGTTAGATCGGGTTAA 1266 0.3815 MGSVSLKIGDGTARFKRASLCSSAVNILMIFCVITTNLFALYAFTSSSSSKNHTNNNSNNVIHNKNISLVSEQVSLILREIDLSQKKLAQMEKQLLGYERFDLSRPNIANELKIFLQRHQLPLGKDSRTGITEMVASVGHSCEKNSDLLSQFMRYKLSATCPDDWSLAQKLILKGCEPLPRRRCFSKTVSKLGFFPLPVSLWKPFGNGNNTFNWSGLKGKKLSRDCVNCFDLASGGNENQRFLKGKSKNDFLIDDVLGLGNGGIRVGFDIGGGSGSFAARMFDRNVTVITNTLNVDAPFSEFIAARGLFPIYLSLDHRFPFYDNVFDLIHASSALDVVGGKSEKLEFLMFDIDRVLRAGGLFWLDNFFCDSEEKKQTLTRLIERFGYKKLKWVVGEKVDSFGSGKPVVVLSAVLQKPVRSG 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05888 421 Coils Coil 74 94 - -
Vivi4g05888 421 Gene3D Vaccinia Virus protein VP39 242 401 IPR029063 -
Vivi4g05888 421 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN-RELATED 24 419 - -
Vivi4g05888 421 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 261 388 IPR004159 GO:0008168
Vivi4g05888 421 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 267 385 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05888 Vivi-Chr4 195642241 195643995 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05888 - - gmx:100812467 662.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05888 4 195642241 195643995 Vivi4g05888 4 195642241 195643995 ECH
Vivi4g05888 4 195642241 195643995 Vivi4g05888 4 195642241 195643995 PCT