Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05883 ATGGTGAAATCTAGCTCCTGTTTAAGATTAATCACATGCAGTGGTGGTGCTGACAAAGAACAAGATCAACAACTTGTTTCTGAGGTTAAGGATTCTAATGATAAGCGCGGTTGGAGTTTTCGGAAGAGATCTGCAAGGCATCGAGTGCTTAGCAATACTGTGATTGCGACTGAGACTCCTCCGTCTACGGCAAATAAGGAGATTTCAGAATATCCGAGTATTAGTTTTCAATCCCCGGCTGAATCTGTTGTTGTTGAAAAGATTTGTACAACAGATTTCTGTAAGGAGAAGCCTCAGTTATCCACCAATGAATACTCAGAGGTGCCGGAGACAATTGTCACTGAAACTGAGGATAAGGCGGATGTCAATCTACCGGAATCTGCTGTGATAATCGTCCAGGCTTCCATTAGAGGATACTTGGCTCAGAGAGCATTGATAAAGAGTAAGAATGTAGTGAAATTGCAAGCTGCTGTTCGCGGGCACTTGGTTAGGAGGCATGCTGTAGGGACGCTGCGATGTGTTCAAGCTATTGTTAAAATGCAGCTCCTTGTGCGAGCACGACAAGCTCGGCATGCACATTCAAATGGCAAAGATGATTACTCAAAAACTTTGGATAATGAGCATCAAACGGCCAAATCAAATGCAAAACACAGTTCTGTGGAAAAGCTTCTCAGCAATAACTTTGCTCGTCAGCTGCTGGAATCAACACCGAAAAACAAATCTATCCATGTCAAATGTAATCCTTCTGAAGGTGACTCTGCTTGGAAATGGTTGGAGAGATGGATGTCTGTTTCAGCGAAAGATTCTGCAGAAAATAAAAAGCCAGTTAGTACGTCCGAACAATTGGATGAAACCCACGATAGCACTCGTGTATCTCAGTTGGATACAGATACTCCATCTGAAGTTATTCTTCAGTTAGCTGATTCACCTCTACCGTCCGAGGACGAAGAGAAAACCTCTACTTACGATGATACCAACTCATACTTTCAAGCAAGCCCCTCTACATCTTCTCTTATAAAGGATAAGTTGGAAGAGGGTCCTCCCGAAAATACGGTTACAGATAATGTTAAAGAAGCATCCCCTGAAATAGATTCTTTCCAAAATGAAATAACGGAATCAAACGCAAGTGTCGGACAGGATTCTGGTTCTCCTCAGAATAGAGATGTTGATGGTGAAATGTCTAGACAATCAGTTACAGCATCTGCCTCGGACCAACTAGAGACCGAGGGAAAGAAAATTGCAGGTGTTTCAAGGAAGTTAAGCAACCCTGCATTTATTGCTGCTCAATCAAAATTTGAAGAGCTGAGTTCAAATGCAAATTCGGGTAGACCAAACTATTTGTTCGATCAGGATGTATCGGTTGAATCACAAGCAGATACTGCATACATATCAAAAGAGTTCATCTCATCTGAGAATTCTACGCCGTTTCCTTCTAGAATTGGTGATCCTGAAAGTGGTACCGTACTCTCTATTAGCTCAACTCTTGATTCACCTGACAGATCCGAGACTTTGGAAAGCGAGCACGATGCCAAAGATTTAGTGGAAGGAATAGTTAATCCTGAAAACAAGACCGGTCACAGTGTTGAGACCGACAATCCTTCTGCCACTCTGACTTCAAACTTACCTATCTCTAGTTCGAATCAATTAGATAACGTTATCGGTCACAGTGGCAATAATGTTGATTCAGTGAACTCCCAAGAGCCTGCGGTTGAGCCTGAGAATAATGCATCTGACTTGCTTACAGAAAAAACCGAGACTGTTCGGCAGGATTTCAAGTTATCTCCAGAAGCTTCACCAGGAAGCTACATGACATTTCCTGAATCTCAAGGAACACCTTCAAGTCAGGTTTCAGTGAAACCTAAAGAGAATAAAATCAGCAAGACTGGATCAAGTAGCAGACGTAGGGTACTGTCTGTCGGCAACAAGTCTCCTGCAAATTCAAACAACGACTCAGGCTCAAGAGTGTCTGTCGGTAACAAGTCTCCTGCGAATGCAAATCCCGACTCAGGATCAAGAGGTAGTAAAGAACAATTGCCTAAGGATCATCTGAATGGAAAAAGACGCAACTCATTTGGCTCGGTAAAACCAGATCACAACGATCAAGAACCTACTAAAGATAACAGTAGTAACAATATATCTCTTCCCCGTTTCATGCAAGCTACACAATCCGCTAGAGCCAAAATAAATGCAAACTCCTCTCCAAGATCAAGTCCAGACGTACACGACCAAGACATTAGCATTAAGAAGAGACATTCCTTACCTGGTGCAACTGGTAGGCAGGGTTCTCCACGCGTCGAACAGTCAATATCTCCAGCTCAGCAAGGAACAAAGGGCAATGGCTCATCTGAGAGAAAATGGCAGAGGTGA 2367 0.4292 MVKSSSCLRLITCSGGADKEQDQQLVSEVKDSNDKRGWSFRKRSARHRVLSNTVIATETPPSTANKEISEYPSISFQSPAESVVVEKICTTDFCKEKPQLSTNEYSEVPETIVTETEDKADVNLPESAVIIVQASIRGYLAQRALIKSKNVVKLQAAVRGHLVRRHAVGTLRCVQAIVKMQLLVRARQARHAHSNGKDDYSKTLDNEHQTAKSNAKHSSVEKLLSNNFARQLLESTPKNKSIHVKCNPSEGDSAWKWLERWMSVSAKDSAENKKPVSTSEQLDETHDSTRVSQLDTDTPSEVILQLADSPLPSEDEEKTSTYDDTNSYFQASPSTSSLIKDKLEEGPPENTVTDNVKEASPEIDSFQNEITESNASVGQDSGSPQNRDVDGEMSRQSVTASASDQLETEGKKIAGVSRKLSNPAFIAAQSKFEELSSNANSGRPNYLFDQDVSVESQADTAYISKEFISSENSTPFPSRIGDPESGTVLSISSTLDSPDRSETLESEHDAKDLVEGIVNPENKTGHSVETDNPSATLTSNLPISSSNQLDNVIGHSGNNVDSVNSQEPAVEPENNASDLLTEKTETVRQDFKLSPEASPGSYMTFPESQGTPSSQVSVKPKENKISKTGSSSRRRVLSVGNKSPANSNNDSGSRVSVGNKSPANANPDSGSRGSKEQLPKDHLNGKRRNSFGSVKPDHNDQEPTKDNSSNNISLPRFMQATQSARAKINANSSPRSSPDVHDQDISIKKRHSLPGATGRQGSPRVEQSISPAQQGTKGNGSSERKWQR 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05883 788 Gene3D - 124 173 - -
Vivi4g05883 788 MobiDBLite consensus disorder prediction 273 291 - -
Vivi4g05883 788 MobiDBLite consensus disorder prediction 323 339 - -
Vivi4g05883 788 MobiDBLite consensus disorder prediction 500 516 - -
Vivi4g05883 788 MobiDBLite consensus disorder prediction 192 220 - -
Vivi4g05883 788 SMART iq_5 124 146 IPR000048 GO:0005515
Vivi4g05883 788 SMART iq_5 147 168 IPR000048 GO:0005515
Vivi4g05883 788 MobiDBLite consensus disorder prediction 467 788 - -
Vivi4g05883 788 Pfam IQ calmodulin-binding motif 149 166 IPR000048 GO:0005515
Vivi4g05883 788 Pfam IQ calmodulin-binding motif 127 144 IPR000048 GO:0005515
Vivi4g05883 788 MobiDBLite consensus disorder prediction 192 215 - -
Vivi4g05883 788 MobiDBLite consensus disorder prediction 467 499 - -
Vivi4g05883 788 MobiDBLite consensus disorder prediction 523 582 - -
Vivi4g05883 788 MobiDBLite consensus disorder prediction 705 740 - -
Vivi4g05883 788 Pfam Protein of unknown function (DUF4005) 702 760 IPR025064 -
Vivi4g05883 788 ProSiteProfiles IQ motif profile. 126 153 IPR000048 GO:0005515
Vivi4g05883 788 MobiDBLite consensus disorder prediction 601 673 - -
Vivi4g05883 788 MobiDBLite consensus disorder prediction 353 406 - -
Vivi4g05883 788 MobiDBLite consensus disorder prediction 266 419 - -
Vivi4g05883 788 ProSiteProfiles IQ motif profile. 147 176 IPR000048 GO:0005515
Vivi4g05883 788 MobiDBLite consensus disorder prediction 674 704 - -
Vivi4g05883 788 MobiDBLite consensus disorder prediction 761 788 - -
Vivi4g05883 788 PANTHER IQ-DOMAIN 5-RELATED 33 760 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05883 104 788 IQD Protein Family AT1G19870 35.574 2.99e-91 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05883 - - cam:101492650 1066.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05883 4 195603251 195607265 Vivi4g05883 4 195603251 195607265 ECH