Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05880 ATGGATACTCTTGTGCTTGTTTATCTACTATTACCAATCTTTGTTCTATTCATTATCCACAAACACAAAACAAGAGCCTCATCAATTCCACCAGGCCCAGCACCACTTCCTCTACTAGGAAATCTACACCTAATTGACACTTCATCCCCACATCTTTCCCTATGGAAACTCTCCAAACACTATGGACCTATCATGTCTTTGCACTTTGGCTATACACCAACCTTAGTTATTTCTTCATCAAATATGGCAAAACATGTGTTGAAAACTCATGACCTTAAGTTTGCAAGTAGACCGGCTTTCCTAGGACTTAGAAAATTGTCATACAATGGGTTGGACTTAGGTTTTGCACCTTATAGTCCTTATTGGAGAGAAATGAAAAAGCTTTGTGTTCTTCATCTTTTTAGTTCTCGGCGTGTTGAATCTTTTAGGCCTATCAGAGAAAATGAAGTGGTCCAATTGATTCAAAAGTTGTCACAATATGAGGGTGATGAAAAAGGTGTTAACTTGAGTGAAGCAGTGATGTCTTTCACAAATACACTTATATGTAAGATAGCTTTTGGGAAAAAGTATGATTTTGATTATGGAGAAGTGGAATTGGGAAGTGGAGAAAGGAAAAGTAGATTGCATGTTTTGCTTAATGAAGCTCAAGCTTTGTTAAGTGAATTTTACTTTTCTGATCATTTTCCATTGTTGGGTTGGGTTGATAGAGTTAGAGGAACTCTTGGGAGGCTTGAAAAAACCTTCAAGGAGTTGGATTTGATATACCAAAAAGTCATTGATGACCATATGGAGAATTCATCATGGCCTAAAACTAAGGAACATGAAGTAGTTGATATCATTGATATCTTCTTGCAAATGATGAATGATCACTCACTCTCTTTTGATCTCACTCTTGACCACATCAAAGCTATGCTTATGAATTTCTTTTTAGCAGGAACAGACACAATTGCAGCAGTAGTAGTTTGGGCTATGACAGCATTGATGAACAATCCAAGAGTGATGAAAAAAGTTCAAATGGAAATCAGAAACTTATATGAAGACAAAGATTTCATAAATGAAGATGATATTGAAAAGCTTCCTTATCTTAAATCAGTGGTAAAAGAGACATTAAGATTATTCCCTCCATCACCATTACTCTTACCAAGAGAAACTATAGAAAATTGCAACATAGATGGTTATGAGATTAAACCAAAAACTCTAGTGTATGTTAATGCATGGGCCATAGCAAGAGATTCTGAGAATTGGGAAGATCCTGAAGAGTTTTATCCTGAAAGATTCTTTATGAGTGGAGTGGATTTTAAAGGGAAGGATTTTGAGTTGATTCCATTTGGAAGTGGAAGAAGAATGTGTCCAGCAATGAACATGGGAGTTGTGACTGTTGAGCTTTCACTTGCTAATATTCTTCATTGTTATGATTGGAAATTACCTTATGGTTTTGATAAGGAAGAGGTTTTGGATACACAAGTGAAACCAGGAATTACTATGCATAAGAAAATTGATCTTTATCTTGTCCCTAGGAAAAGAAAATCTTAG 1533 0.3575 MDTLVLVYLLLPIFVLFIIHKHKTRASSIPPGPAPLPLLGNLHLIDTSSPHLSLWKLSKHYGPIMSLHFGYTPTLVISSSNMAKHVLKTHDLKFASRPAFLGLRKLSYNGLDLGFAPYSPYWREMKKLCVLHLFSSRRVESFRPIRENEVVQLIQKLSQYEGDEKGVNLSEAVMSFTNTLICKIAFGKKYDFDYGEVELGSGERKSRLHVLLNEAQALLSEFYFSDHFPLLGWVDRVRGTLGRLEKTFKELDLIYQKVIDDHMENSSWPKTKEHEVVDIIDIFLQMMNDHSLSFDLTLDHIKAMLMNFFLAGTDTIAAVVVWAMTALMNNPRVMKKVQMEIRNLYEDKDFINEDDIEKLPYLKSVVKETLRLFPPSPLLLPRETIENCNIDGYEIKPKTLVYVNAWAIARDSENWEDPEEFYPERFFMSGVDFKGKDFELIPFGSGRRMCPAMNMGVVTVELSLANILHCYDWKLPYGFDKEEVLDTQVKPGITMHKKIDLYLVPRKRKS 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05880 510 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g05880 510 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g05880 510 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g05880 510 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g05880 510 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g05880 510 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g05880 510 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g05880 510 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g05880 510 PRINTS E-class P450 group I signature 82 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g05880 510 FunFam Cytochrome P450 83B1 17 504 - -
Vivi4g05880 510 Pfam Cytochrome P450 30 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g05880 510 Coils Coil 334 354 - -
Vivi4g05880 510 CDD CYP71-like 61 501 - -
Vivi4g05880 510 SUPERFAMILY Cytochrome P450 30 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g05880 510 Gene3D Cytochrome P450 22 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g05880 510 PANTHER CYTOCHROME P450 71B11-RELATED 15 506 - -
Vivi4g05880 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Vivi4g05880 510 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g05880 510 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g05880 510 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05880 Vivi-Chr4 195571209 195573368 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05880 1 507 Cytochrome P450 AT4G31500 44.902 6.33e-159 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05880 - - gmx:606704 652.514