Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05869 ATGGATAACGAAGATTTGAGGTCAGGGACGAAAAAGAAGAAGAGATCCAAACCGATTGAAATTGGTTTTGATTCAGATAACGATAAACCAATTGGATCGTTTTTGAAGTTGAAGAGGAATAAGAAGAAGGTTAGTTTTGCATCAGAGGGTTCTTGTGGTGGAGATTCTGTTAAGGAAAAGGAGAATTCTAGGGTTATGGATGATAATGATACCTTGGCTACCTTTAGGAAAAGGTTGAAGGGTCCAAAGAGAGATCAGGGATATGGTTTGAATGTTGCTGTTGAGGGTAATGGTTTGGGAAGTGGCGGATCTGGGAAAGGTGATGATGACATGCAGGTGCATCATGATCATGATTCTGATCAGCATATGGAAGAATCGTTGTCTACGATTTTCCATAAGGCGCAATCTAGTTCTGGTAGGAAATCCCGTGCCGCGTTAGGTTCAAAGCAGAAAAAACGGAATCGGAATGTGGACAGTGGGTTGAAACATGGTTCCGGAAGTTTAACAGAAAATGTAGATTATGTGGTTGAAAGTAGATCTGGATCTGCTTCTGCCTTGAAATCGGTTGAGAGAAATCACGAGTCTGATCAAAAGGGTAGCGGTGACTGTTTGCAAGAGGAAAAGGCGAAGGGTATTTGTGATTCAAACATTCCTGATGAACCGTCGGTTGATCACTCTAACTCGATCATTGCCTGCGATGGCGATGGACAGCAATTGTCAAGTGTACAAGTTGAAAATGTTTGTGGTGCTTCTGATGAAATTGTTACATTGCAAGAAAGAATTATCGATAATAGTTTGAATCAGTGTTCTTCCATGTTACAAGATGTTGAAATAGTTGATATTAGCTCTCCCTCTAAAGTGGGGGAAAGGGTATGTGGACTTTCCGAGACTGGAGAGCTTGAGAATAATAGATCAAATGATGAAATAGCAGAAGAACAGATGTGTAATGGTGCTTCAGAAGGAGGTGTTTCTTCTTCCGCAGAGAAAGAAGTTTTGTTAACTTGTCACACCGAGCTCTTGAATAAATTAAATGAAAATAATCCCATGGTTTCTGGTAGAGATTGCTATGATTATAGTCCTTTAGAAACAAATGCTGAAGTACAAGATGTTGTTGTAGGCTGCTCACCTGAAAAACATGAAGCAATTGCCAGCGGTAGTTTATCCTCTATTTTGCGTAATGATGCCAATGAATCTGAATTGATTGTCCAATCAAATCTCCCGGACAGACCTTTGGAAATGTGTAATATTCCAAAATACTCTAATGCATCCATTCTGAAGTGCAGCTATGCCTTAGATCCAAATCAATCTGATGGATCCTCTATACAATCTTCAATTCCAGATGAAAATGGAAACACTACAGAATATCATGCCTCTGTGTCTGATTTTGCTGACAATGGTGGTAAGATATCTGGCACTCCTCGTGCAACACGAAAGACCAAAATGAATAAGCACGGCGACATGACTTATGAGGGGGATGCTGATTGGGAGATTTTAATAAATGATAAAACCCTAATTGGAAGCCAAGATGCTGCAGACGGTGAACGTACTCTTAGAACAAGAGTGAAGCAAGATTCCTCTTTGATTGCTGTTGAGGACTCTGAAAGTGTTGCAGTAGCGGCAGTATCTGCTGGGCTGAAAGCTCGTGCAGTCGGTCCAATTGAGAAAATAAAATTTAAAGAGATCTTGAAGCGTAAGGGTGGTCTCAAGGAATATTTAGATTGCAGGAATAAGATCTTAAACCTATGGAGCAGTGATGTCACCCGTATTTTACCTCTAGCTGAATGTGGAGCTAGTTATACCCGTTCTGAGAATGAAAGTCCTCGTTCTTCTCTTATTAGGGAGGTCTATGCATTTCTTGATCAATATGGTTATATAAATGTCGGAGTTGCCTCTCAAAAGGAGAATGTGGAGAACTGTGCAAGACATTGTTACAAACTTGTAAAAGAAAAAGGATTCGAGGAAAGTTCTACCGCTTCATTGGCCGGCTCTGAAGATGGAGTTTCTTTTAATGTTGGTCAGACTAAAATGTCATATGCTTCTATGGATATTAACAATGATCTAATAAAGGATTTTAAAGACCTGACAACTGAAGCTGCAGAGGGCATGATGCATGTTGACGAAGTGATGAGAGATTCATCAAACATGGCACACCATGAAAGAAAAAATCATGATGACCAGGAAAATGTTGGGATTCAAGATGGAGTCAGTGGAAATATACATTTCAATGATAACAGTGCTGTTCCTTCTTTTAACTTTCCTGATTGCAGATTGACTTCTCTTGTTGCTACAAAACAAAACAGTGAATCTAAATGTGTTAAACATGCATTAGGGGATCATATAGGTGATACTCTGCAGTCTGATTTAGAGGCTAGAAAGAGAGTGATTATAATTGGAGCTGGTCCTGCTGGGCTAACTGCTGCTCGCCACTTGAATCGTCAGGGGTTTACTGTAACTGTGCTTGAGGCTAGGAATAGGATAGGAGGTCGGGTATTTACAGATCACTCGTCTCTTTCTGTCCCTGTGGATCTTGGTGCTAGCATTATCACAGGTGTTGAGGCTGATGTGGCCACTGAGAGAAGACCAGATCCTTCCTCGTTGGTTTGTGCTCAGCTGGGCCTTGAATTGTCAGTGTTAAACAGTGACTGCCCTCTTTATGACACAGTGACTGGTCAAAAAGTTCCAACAGATATGGATGAAGCATTGGAAGCCGAATACAACAGTCTTCTTGATGACATGGTACTGGTTGTTGCTCGGAAAGGTGAACAAGCAATGAAAATGTCTCTTGAAGATGGTTTAGAATACGCCCTTAAGATTCGCCGCATGGGACTTACCGAAGGCAGTGAAGAAACTAAGCAAAATTTTGATGAGGAGATTTTGGATCCCCAGGAGAGGAGGGTTATGGATTGGCACTTTGCTCATTTGGAGTATGGCTGTGCTGCTTTGCTTAAAGAAGTTTCTCTTCCCTATTGGAATCAAGACGACGTGTATGGAGGATTTGGGGGACCTCATTGTATGATCAAAGGAGGTTATAGCACAGTTGTCGAGTCTCTTGGAGAAGGGCTTGCTATTCACATGAACCACACTGTCACAAATGTTTCATATGGTATCAAAGAACCTGGCGAGAATAATAAAGTCAAAGTTTCTACATTGAATGGCAATGAGTTTTTTGGAGATGCAGTCCTCATTACTGTCCCACTTGGCTGTTTGAAAGCTGAAACTATACAGTTCTCCCCCTCTTTGCCAGAGTGGAAATGCTCTTCCATTCAGCGTCTTGGCTTTGGAGTTCTCAATAAAGTGGTTTTGGAATTTCCTAATGTGTTTTGGGATGATGCGGTGGACTACTTTGGAGCAACAGCTGAGGATAGAAGCAAAAGAGGTCACTGCTTTATGTTCTGGAATGTCAAGAAAACTGTTGGGGCTCCTGTCCTTATAGCATTAGTGGTTGGTAAGGCAGCCATTGACAGTCAAAGTTTAAGTTCTTCTGATCATGTCAACCATGCATTGAAGGTTCTTCGGAAACTTTTTGGGGAGGATTCAGTTCCTGATCCTGTTGGGCATGTTGTGACAGATTGGGGTAGGGATCCCTATAGCTTTGGTGCTTACTCTTATGTTGCTGTTGGAGCATCAGGAGAAGACTACGATATCTTAGGAAGACCAGTTGATAACTGCTTGTTTTTTGCTGGTGAAGCAACCTGCAAAGAGCATCCTGACACTGTTGGTGGTGCAATGATGAGTGGACTACGAGAGGCTGTTCGCATAATTGACATATTGAACACAGGAAATGACAATACTGCAGAGTTAGAGGCACTGGAAGCTGCACAGGGACAGTTGGACACTGAAAGGAATGAAGTTAGGGACATAATAAAGAGACTTGATGCAGTTGAGCTTTCTAACATACTATATAAGAACTCTTTTGAGGGTGCTCAAATCATAACCCGAGAAGCTTTATTAAAGGAAATGTTTCTCAATGTTAAAACCAATGCTGGGCGCTTGCATGTGGCCAAACAATTGCTAAGTCTTCCTGTTGGAAACTTGAAGTCCATTGCTGGAAGTAAGGAGGGGCTAACTGTTCTCAACTCCTGGATACTGGACTCAATGGGAAAAGATGGCACCCAACTCTTGAGGCATTGTTTGCGTCTTCTTGTGCGCGTGTCCACCGATCTAGGTGCTGTACGCTTATCAGGAATGGGGAAAACAGTGAAGGAAAAAGTTTGTGTACATACTAGCCGTGATATTCGAGCTATAGCTAGTCAATTGGTCAATGTATGGCTTGAAATTTTCCGCAAGGAAAAAGCTTCTAATGGGGGATTAAAGTTGTCAAGACAAATAACTACTCTTGAGTTATCGAAGAGAAAATCTTTAAAAGATTCAGGCTCAGGGAAGCCCCCTCTAAGCATACATCAGAGTGCCGTTGAGAATAAAGAAGGCTTGCTGAATCCTGTATCTGCTGGAAGCAATTCACCTTCCACCACACATGCGAGGAAATTGCACAGCAAACAAGGAAGACAACAATCAGCATGTGACTCAAGGCATGAAGTCAGTTCTTCCAGGTCCCAAGGTTCAATAGACAAAATAGTTACTAAGGAGGAGAATAAACGCTATGCCATGTCTGAAGAAGAAAAGGCTGCTATAGCTGCTGCAGAAGCTGCCCGTACTAAAGCAATTGCTGCTGCTGAGGCATATGCCTCTGCAGAAGCTAGGTGCAGTACACTGTCACAGCTTCCGAAGATACCCTCATTCCATAAATTTGCTAGACGAGAGCAGTATTCACAAAATGATGAGATTGATAGTAGAAAAAAGTTGCCCGGTGGTTTTTTCGGAAGGCAAGATTGTGTTTCCGAGATTGATTCTAGGAATTGCAGAGTTAGGGAATGGTCTGTTGATTTTTCCACCGCTTGTGTTAATCTTGATAGTTCTAAAATACCGGTTGACAATTTCTCTCAGAGGAGTCATTCAAATGAGATTGCCAGCCATTTGAATTTCGGAGAGCGTTCAGGAGAAAGTGCTGCTGTGGACAGTAATCTATATACAAAAGCTTGGATTGACACAGCTGGTGATGGGGTGGTAAAAGATCATCTTGCCATAGAGAGATGGCAATCTCAAGCAGCTGAAGCTGATTCTTATTTTTCTGATCAAATCAATCATTTGAATGATGAGGAGGATTCAAATGCCTATTCAAGGTTACCCAGATGGAAACATGACAATGTAGTAAATGAGAGTTCTGTTTCCCAGGTTACTGTAAATAAGGAAGAGGCCTTCAAACATTCTCGAGGAGCAGATCATATTAAACAGGCTGTTGTTGACTATGTTGGATCACTACTTATGCCCCTTTATAAGGCTAGGAAACTAGACAAGGATGGATACAAGGCAATAATGAAGAAAAGTGCAACAAAGGTCATGGAGCAAGCAACGGATGCAGAAAAAGGCATGACTGTCCGTGAGTTTCTAGACTTTAAACGAAGGAATAAGATTCGCTCGTTTGTGGATATATTGATTGAGAGACATATGGCAACAAAACCGGGTACAAAATCATAA 5535 0.4163 MDNEDLRSGTKKKKRSKPIEIGFDSDNDKPIGSFLKLKRNKKKVSFASEGSCGGDSVKEKENSRVMDDNDTLATFRKRLKGPKRDQGYGLNVAVEGNGLGSGGSGKGDDDMQVHHDHDSDQHMEESLSTIFHKAQSSSGRKSRAALGSKQKKRNRNVDSGLKHGSGSLTENVDYVVESRSGSASALKSVERNHESDQKGSGDCLQEEKAKGICDSNIPDEPSVDHSNSIIACDGDGQQLSSVQVENVCGASDEIVTLQERIIDNSLNQCSSMLQDVEIVDISSPSKVGERVCGLSETGELENNRSNDEIAEEQMCNGASEGGVSSSAEKEVLLTCHTELLNKLNENNPMVSGRDCYDYSPLETNAEVQDVVVGCSPEKHEAIASGSLSSILRNDANESELIVQSNLPDRPLEMCNIPKYSNASILKCSYALDPNQSDGSSIQSSIPDENGNTTEYHASVSDFADNGGKISGTPRATRKTKMNKHGDMTYEGDADWEILINDKTLIGSQDAADGERTLRTRVKQDSSLIAVEDSESVAVAAVSAGLKARAVGPIEKIKFKEILKRKGGLKEYLDCRNKILNLWSSDVTRILPLAECGASYTRSENESPRSSLIREVYAFLDQYGYINVGVASQKENVENCARHCYKLVKEKGFEESSTASLAGSEDGVSFNVGQTKMSYASMDINNDLIKDFKDLTTEAAEGMMHVDEVMRDSSNMAHHERKNHDDQENVGIQDGVSGNIHFNDNSAVPSFNFPDCRLTSLVATKQNSESKCVKHALGDHIGDTLQSDLEARKRVIIIGAGPAGLTAARHLNRQGFTVTVLEARNRIGGRVFTDHSSLSVPVDLGASIITGVEADVATERRPDPSSLVCAQLGLELSVLNSDCPLYDTVTGQKVPTDMDEALEAEYNSLLDDMVLVVARKGEQAMKMSLEDGLEYALKIRRMGLTEGSEETKQNFDEEILDPQERRVMDWHFAHLEYGCAALLKEVSLPYWNQDDVYGGFGGPHCMIKGGYSTVVESLGEGLAIHMNHTVTNVSYGIKEPGENNKVKVSTLNGNEFFGDAVLITVPLGCLKAETIQFSPSLPEWKCSSIQRLGFGVLNKVVLEFPNVFWDDAVDYFGATAEDRSKRGHCFMFWNVKKTVGAPVLIALVVGKAAIDSQSLSSSDHVNHALKVLRKLFGEDSVPDPVGHVVTDWGRDPYSFGAYSYVAVGASGEDYDILGRPVDNCLFFAGEATCKEHPDTVGGAMMSGLREAVRIIDILNTGNDNTAELEALEAAQGQLDTERNEVRDIIKRLDAVELSNILYKNSFEGAQIITREALLKEMFLNVKTNAGRLHVAKQLLSLPVGNLKSIAGSKEGLTVLNSWILDSMGKDGTQLLRHCLRLLVRVSTDLGAVRLSGMGKTVKEKVCVHTSRDIRAIASQLVNVWLEIFRKEKASNGGLKLSRQITTLELSKRKSLKDSGSGKPPLSIHQSAVENKEGLLNPVSAGSNSPSTTHARKLHSKQGRQQSACDSRHEVSSSRSQGSIDKIVTKEENKRYAMSEEEKAAIAAAEAARTKAIAAAEAYASAEARCSTLSQLPKIPSFHKFARREQYSQNDEIDSRKKLPGGFFGRQDCVSEIDSRNCRVREWSVDFSTACVNLDSSKIPVDNFSQRSHSNEIASHLNFGERSGESAAVDSNLYTKAWIDTAGDGVVKDHLAIERWQSQAAEADSYFSDQINHLNDEEDSNAYSRLPRWKHDNVVNESSVSQVTVNKEEAFKHSRGADHIKQAVVDYVGSLLMPLYKARKLDKDGYKAIMKKSATKVMEQATDAEKGMTVREFLDFKRRNKIRSFVDILIERHMATKPGTKS 1844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05869 1844 SUPERFAMILY FAD-linked reductases, C-terminal domain 1092 1203 - -
Vivi4g05869 1844 PANTHER FLAVIN MONOAMINE OXIDASE 792 1261 - -
Vivi4g05869 1844 MobiDBLite consensus disorder prediction 1478 1526 - -
Vivi4g05869 1844 MobiDBLite consensus disorder prediction 189 205 - -
Vivi4g05869 1844 SUPERFAMILY FAD/NAD(P)-binding domain 791 1257 IPR036188 -
Vivi4g05869 1844 MobiDBLite consensus disorder prediction 1 24 - -
Vivi4g05869 1844 Gene3D - 794 1252 IPR036188 -
Vivi4g05869 1844 MobiDBLite consensus disorder prediction 460 484 - -
Vivi4g05869 1844 Gene3D - 535 640 IPR036388 -
Vivi4g05869 1844 SUPERFAMILY Homeodomain-like 534 632 IPR009057 -
Vivi4g05869 1844 ProSiteProfiles SWIRM domain profile. 536 636 IPR007526 GO:0005515
Vivi4g05869 1844 Gene3D - 881 1209 - -
Vivi4g05869 1844 PRINTS Adrenodoxin reductase family signature 793 815 - -
Vivi4g05869 1844 PRINTS Adrenodoxin reductase family signature 816 829 - -
Vivi4g05869 1844 Pfam Flavin containing amine oxidoreductase 802 1254 IPR002937 GO:0016491
Vivi4g05869 1844 MobiDBLite consensus disorder prediction 1 31 - -
Vivi4g05869 1844 FunFam Lysine-specific histone demethylase 1A 535 638 - -
Vivi4g05869 1844 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 1352 1436 IPR035441 -
Vivi4g05869 1844 Coils Coil 1270 1290 - -
Vivi4g05869 1844 Pfam SWIRM domain 546 626 IPR007526 GO:0005515
Vivi4g05869 1844 MobiDBLite consensus disorder prediction 128 144 - -
Vivi4g05869 1844 MobiDBLite consensus disorder prediction 185 205 - -
Vivi4g05869 1844 MobiDBLite consensus disorder prediction 1479 1522 - -
Vivi4g05869 1844 MobiDBLite consensus disorder prediction 45 170 - -
Vivi4g05869 1844 MobiDBLite consensus disorder prediction 54 84 - -
Vivi4g05869 1844 MobiDBLite consensus disorder prediction 108 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05869 Vivi-Chr4 195353256 195362625 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-SWI3 Vivi4g05869 Amino_oxidase 2.5e-106 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05869 - - gmx:100779479 2510.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05869 4 195353256 195362625 Vivi4g05869 4 195353256 195362625 ECH