Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05862 ATGGATGCTGCGGTGGTCACCGGCGTTGCCATCGGTGTCGGGCTATCAACTCCTCGCCGTCTCACACGTTTCTCCAAAAAACCTAACCGCCTCCACTCATCCGTCTTCTCCGCCACCAGCAAATGGGCGGAACGACTCATTTCCGATTTCCAGTTCCTCGGCGACACATCTTCGTCATCTTCCTCCTCCGCCACCGCCGTTACTCCGACTTCTTCTTTCCCTCCTCAACTCGACTCTCCTCCCATTGAACGCCACGTGTTACTCCCTCTCGACCTGTACAAAATTCTCGGCGCAGAAACGCATTTTCTCGGTGATGGCATTCGGAGGGCTTACGAAGCGAAATTCTCGAAGCTGCCTCAGTATGCTTTCAGCAACGAAGCTTTGATTAGCCGTCGCCAGATTCTTCAAGCGGCTTGCGAAACCCTAGCTGATCCTGCTTCCAGACGAGAGTACAATCAAAGCATCGTTGATAATGTTGATGATTCTTCATTTCTCACTGAAATCCCTTTTGACAAAGTTCCTGGAGCTCTTTGTGTGTTGCAGGAAGCTGGAGAGATGGAGTTGGTGCTTAGGATTGGTGGGGATTTGCTAAGAGAGAGGTTGCCGAAGACGTTTAAGCAAGATGTTGTGTTGGCTATGGCGCTTGCTTATGTTGACATTTCAAGGGATGCTATGGCTTTGTCTCCAGCAGATTTCATTGTCGCTTGTGAGATGCTCGAGAGGGCATTGAAGCTTTTGCAGGAAGAAGGGGCAAGCAACCTAGCTCCAGATTTACAAACACAGATTGATGAGACACTTGAAGAGATAACCCCACGCTGTGTATTAGAACTTTTAGCCTTGCCTCTTGATGATGAGCATCGAGCACGGAGAGAGGAAGGTCTCCAAGGTGTCCGCAACATTCTGTGGACAGTTGGAGGTGGAGGAGCAGCAGCAATTGCTGGGAGTTTCACTCGTGAAGATTTCATGAACGAGGCATTCCTGCATATGAAAGCAGCCGAACAGGTCGAACTTTTTGTAGGAACCCCTAGTAATATTCCAGCTGAAAGTTTTGAGGCGTATGGGGTGGCACTTGCATTGGTTGCACAAGCCTTCGTAGGTAAAAAGCCACATCTTATCCAAGATGCTGATAACTTATTCAATCAACTTCAGCAAACTAAGGTAACAAATATTAGGAATGCTCCCTCTCTTTATACTCCCATGGAGATGGAGAAGAGAGAGGTTGATTTTGCATTAGAAAGGGGTCTGTGTGCACTGCTTGTTGGGGAGCTCGATCAGTGTAGGTCTTGGTTGGGACTTGATAGTGACAGCTCTCCTTATCGAAACCCATCTATTATTGACTTTATTATGGAAAATGCAAAGGGTGATGATGAAGACAGTGATCTTCCCGGACTATGTAAATTGTTGGAGACATGGTTGATGGAGGTGGTTTTCCCCAGGTTTAGAGATACTAAAGACACAAGCTTTAAGCTTGGAGATTACTATGATGACCCTACAGTGCTAAGCTATCTAGAGAAGCTGGAGGGTGCTGATCGTTCACCCCTGGCTGCTGCAGCAGCCGTAGCGAAAATTGGAGCTGAGGCTACTGCTGTTATAGGCCAGATCCAAGCTAGTGCAATTAAAGCATTGAAGAGGGTTTTTCCTGTTAGCCCCAATGATAAAATCTTGACACATTTAGAAAATGGTGAGAAGAATAATTCAAGCCTTTCTGAAAATGATGATCCCCTGACATTCTCAAATCAGGATACTTCAGTCGATGTTGAGGTTTCGGGAATAAAAAATACTGCTGAGATAAATGATGGAAATTTTATTACTGACGAAATTAAAAATGCTAGTGTGAGTATCATGTGTGCTGGTGTAGTCATTGGACTCATAACTTTAGCTGGTTTGAAGTTTTTACCTGCTAGACCCATTCTTCAAAAAGTGCCTGGTTCAGCAATTGCATCAGATACTATCAATATAGGAGATGAAGAATTAGTTGAGCAATTACCAAAAATGAATGCAAGGGTTGCAGAAGCAATAGTTCGCAAGTGGCAACACATCAAATCCCAAGCTTTTGGACCTGATCATTGCCTAGTAAGCTTGCAAGAGGTGTTGGATGGTGAAATGTTGAAGATATGGACTGATCGAGCAGCCGAGATTGCAGAGCTTGGTTGGTCCTATGACTACAACTTGGAGGATCTCAACATAGACAGTGTGACTATATCACAGAATGGACAACGCGCAGTGGTGGAAACAACTCTCAAAGAATCTACACACCTCACTGCTGTAGGTCATCCACAACATGATGCTTCTAACAGCAGAATCTACACAACAAGATATGAAATGTCTTTTTCAGGTTCAGGATGGAAAATTGTTGAAGGAGCTGTCCTTGAGTCATAA 2379 0.4515 MDAAVVTGVAIGVGLSTPRRLTRFSKKPNRLHSSVFSATSKWAERLISDFQFLGDTSSSSSSSATAVTPTSSFPPQLDSPPIERHVLLPLDLYKILGAETHFLGDGIRRAYEAKFSKLPQYAFSNEALISRRQILQAACETLADPASRREYNQSIVDNVDDSSFLTEIPFDKVPGALCVLQEAGEMELVLRIGGDLLRERLPKTFKQDVVLAMALAYVDISRDAMALSPADFIVACEMLERALKLLQEEGASNLAPDLQTQIDETLEEITPRCVLELLALPLDDEHRARREEGLQGVRNILWTVGGGGAAAIAGSFTREDFMNEAFLHMKAAEQVELFVGTPSNIPAESFEAYGVALALVAQAFVGKKPHLIQDADNLFNQLQQTKVTNIRNAPSLYTPMEMEKREVDFALERGLCALLVGELDQCRSWLGLDSDSSPYRNPSIIDFIMENAKGDDEDSDLPGLCKLLETWLMEVVFPRFRDTKDTSFKLGDYYDDPTVLSYLEKLEGADRSPLAAAAAVAKIGAEATAVIGQIQASAIKALKRVFPVSPNDKILTHLENGEKNNSSLSENDDPLTFSNQDTSVDVEVSGIKNTAEINDGNFITDEIKNASVSIMCAGVVIGLITLAGLKFLPARPILQKVPGSAIASDTINIGDEELVEQLPKMNARVAEAIVRKWQHIKSQAFGPDHCLVSLQEVLDGEMLKIWTDRAAEIAELGWSYDYNLEDLNIDSVTISQNGQRAVVETTLKESTHLTAVGHPQHDASNSRIYTTRYEMSFSGSGWKIVEGAVLES 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05862 792 SUPERFAMILY Chaperone J-domain 89 158 IPR036869 -
Vivi4g05862 792 PANTHER PLASTID DIVISION PROTEIN CDP1, CHLOROPLASTIC-RELATED 29 791 IPR044685 -
Vivi4g05862 792 MobiDBLite consensus disorder prediction 57 73 - -
Vivi4g05862 792 Pfam ARC6-like, IMS domain 670 784 IPR025344 -
Vivi4g05862 792 MobiDBLite consensus disorder prediction 57 78 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05862 - - gmx:100790455 1187.17