Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05856 ATGGCTGATTCAGTCTCTTCTAAGAGAATGTGGTTTTCTATTCCTGAAAGGTTTCAACTGCATGTGGCCATGCTGGCTTTGCAGTTTGGTTATGCTGGTTTTCATGTTGTCTCAAGAGCTGCTCTTAACATGGGAATCAGCAAACTTGTTTTTCCTGTTTATAGGAACATCATTGCTCTTCTTCTACTTCTTCCCTTTGCCTATTTCTTGGAAAAGAAAGACAGACCACCAATTAATTTCAACTTTCTATGCCAGTTCTTTTTTCTAGCACTTATTGGAATTACAGCAAATCAAGGTTTCTACTTGCTTGGTTTAGAGAATACAACTCCAACTTTTGCATCAGCAATACAAAATTCAGTCCCTGCTATAACATTTCTTATGGCAGTAATACTAAGAATAGAGCAAGTGAGACTGAATAGGAAAGATGGATTAGCAAAAGTATCCGGAACAATATTCTGTGTAATCGGTGCAACAGTGATTACCTTATACAAAGGTCCAACAGTATATACTCCAAGCAATCACCTAAATAGTACTGCAACATTGATAACAGAAGTAACAACAACACCAATGATTGATTTTGGAACATGGTCTTTGGGTGATGCTGAGGGAAAAAACTGGACACTAGGATGTATTTATCTTATTGGACATTGTTTGTCTTGGTCTGCTTGGCTTGTGTTTCAAGCACCGATCCTTAAGAAGTATCCTGCTCGTCTTTCTGTCACTTCTTATACATGTTTCTTTGGTCTCTTGCAATTTCTTCTTATTGCTTTGGTTTGTGAAAGAAATTCTCAAGCTTGGTTATTTCACTCTGGTGGCGAAGCTTTCACTATTCTATACGCCGGAGTGGTGGCATCTGGAATTGCTTTTGCAGTACAAATATGGTGTATTGATAGAGGAGGTCCAGTGTTTGTTGCTGTCTATCAACCTGTTCAAACTTTTGTTGTTGCTATCATGGCTTCCATTGCTTTAGGAGAAGAGTTCTACTTGGGAGGGGTCATTGGAGCAATATTGATTGTAGCTGGTCTATACTTTGTCTTGTGGGGTAAAAGTGAAGAGAAGAAATTTGCAAAAGAGCAGCTAGCAATTGCATCATCAACTACAGAACATAGCAACATTAGGCCCACAAGTGTTGCTAAAGGATCATCACTTAATCAACCATTTCTCTCTTCATCAAATGAAAATGTTTGA 1188 0.3838 MADSVSSKRMWFSIPERFQLHVAMLALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIALLLLLPFAYFLEKKDRPPINFNFLCQFFFLALIGITANQGFYLLGLENTTPTFASAIQNSVPAITFLMAVILRIEQVRLNRKDGLAKVSGTIFCVIGATVITLYKGPTVYTPSNHLNSTATLITEVTTTPMIDFGTWSLGDAEGKNWTLGCIYLIGHCLSWSAWLVFQAPILKKYPARLSVTSYTCFFGLLQFLLIALVCERNSQAWLFHSGGEAFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTFVVAIMASIALGEEFYLGGVIGAILIVAGLYFVLWGKSEEKKFAKEQLAIASSTTEHSNIRPTSVAKGSSLNQPFLSSSNENV 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05856 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 54 164 - -
Vivi4g05856 395 Pfam EamA-like transporter family 208 346 IPR000620 GO:0016020
Vivi4g05856 395 Pfam EamA-like transporter family 24 161 IPR000620 GO:0016020
Vivi4g05856 395 MobiDBLite consensus disorder prediction 364 395 - -
Vivi4g05856 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 253 350 - -
Vivi4g05856 395 PANTHER WAT1-RELATED PROTEIN 22 360 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05856 Vivi-Chr4 195109910 195112451 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05856 1 395 Nodulin-like Gene Family AT1G75500 72.111 0.0 592