Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05854 ATGGCTTCACTGACTTCACCACCACCATCATTTCTCACCTTTCATCCCCGCCAAACTCGCCTCTTCTCCAGTTCAACTCTTCAATTCCTTCCACTCCCACTTCATCTTCCACCAAGGACAATCAAACTCCAACATAAACGCAAAACAGTAGAATGCAGAGTTACGAATCCAAACCCTCCATCGTCAACGGCGTTAACAAAGGAGCCTCACAAATACTTCGACCACGTTACCATAACCGTTCGCGGAGGCGACGGCGGTCACGGATCGATTCTGAACCAGAAACCTAAAAAAGAAGCTGAAAAGGGCAAAAAAGGAAAAGGGATTGATAGTCATAAGAGAAGTGCGTTGAAGAGGGATTTTGATGGATCGGTTATACTTCCGATGGGCGGTCATGGTGGCGATGTTGTTATCTATGCGGATGAGAGTAAAGATACTTTGTTAGAGTTTCATAATAAGAATAGGTTTAATGCGAAACGCGGAGGGAATGTTGATGCGGTTGGTGTGTTTACTTCTTACTTGCGGAATGGAATTGCTGCTCCTGCTGTTAGGATTGCTGTTCCTCTAGGTACAGTTGTGAAAAGCAAACGAGGAAAGATGTTAGCTGATCTAGCACGACATGGTGATGAAGTTCTTGTTGCGAGGGGTGGACAAGGAGGGATTAGCTTGTTAGAAATGCCAAAACATAATAGGAAAAAGACGACGAGTTTGACAACAAACATGATGAGAGATGACTCGGATAAGGTTTTAGTTCACGGTCAACCTGGGGAGGAAGTTAAGTTGGAGTTGACCCTACGAGTCGTAGCTGACGTTGGTTTGGTTGGACTTCCAAATGCTGGGAAATCAACGCTTCTGGGAGCCATTACACTTGCAAAACCCGATATTGCTGATTATCCTTTTACAACATTAATGCCAAATCTTGGGCGCCTTGATGGTGATCCCAACTTGGGAGCTGGAATGTATTCATCTGAAGCCACATTGGCTGATTTGCCCGGCCTTATTGAAGGTGCTCACTTGGGAAAGGGTCTTGGTCGCAATTTTTTGAGGCACCTAAGAAGAACACGTCTATTGGTCCATGTTGTTGATGCATCTACTGAAAACCCTGTAAACGACTACAGAACTGTCAGAGAAGAGTTGCGCATGTATAACCCTGAGTACCTTGAACGACCATACATTGTTGTTTTGAATAAGATTGACCTTCCAGAGGTTGAGGACAAGCTTCCAATATTGACTCAAGAAATTCTAAGAATTGGCAGCGATGGTACAGCTTCAGCTTCTGAACAAAATCCAAATTCTGAAATTCCTGCTCAATTATTGTCTGACGAAAGTGACACAAAGGAAAAAAAACTTGAGGACTATCCACGACCTCACTCTGTTATCGGAGTTAGTGTTCTAAAGCGTATTAGGATTAAGGAGATGTTAAAGGAGATAAGGGCCGCTTTAAGGCATTGCAATGATTCCAATGGAGCATTGGCTTCCAGTGTCGTGCGGTGA 1491 0.4406 MASLTSPPPSFLTFHPRQTRLFSSSTLQFLPLPLHLPPRTIKLQHKRKTVECRVTNPNPPSSTALTKEPHKYFDHVTITVRGGDGGHGSILNQKPKKEAEKGKKGKGIDSHKRSALKRDFDGSVILPMGGHGGDVVIYADESKDTLLEFHNKNRFNAKRGGNVDAVGVFTSYLRNGIAAPAVRIAVPLGTVVKSKRGKMLADLARHGDEVLVARGGQGGISLLEMPKHNRKKTTSLTTNMMRDDSDKVLVHGQPGEEVKLELTLRVVADVGLVGLPNAGKSTLLGAITLAKPDIADYPFTTLMPNLGRLDGDPNLGAGMYSSEATLADLPGLIEGAHLGKGLGRNFLRHLRRTRLLVHVVDASTENPVNDYRTVREELRMYNPEYLERPYIVVLNKIDLPEVEDKLPILTQEILRIGSDGTASASEQNPNSEIPAQLLSDESDTKEKKLEDYPRPHSVIGVSVLKRIRIKEMLKEIRAALRHCNDSNGALASSVVR 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05854 496 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 268 481 IPR031167 GO:0005525
Vivi4g05854 496 MobiDBLite consensus disorder prediction 83 113 - -
Vivi4g05854 496 MobiDBLite consensus disorder prediction 420 451 - -
Vivi4g05854 496 Pfam 50S ribosome-binding GTPase 269 396 IPR006073 GO:0005525
Vivi4g05854 496 Pfam GTP1/OBG 101 265 IPR006169 -
Vivi4g05854 496 PANTHER DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED 66 478 IPR045086 GO:0003924|GO:0005525
Vivi4g05854 496 MobiDBLite consensus disorder prediction 91 113 - -
Vivi4g05854 496 CDD Obg 268 413 IPR031167 GO:0005525
Vivi4g05854 496 MobiDBLite consensus disorder prediction 420 438 - -
Vivi4g05854 496 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 269 480 IPR027417 -
Vivi4g05854 496 Gene3D - 267 487 IPR027417 -
Vivi4g05854 496 PRINTS GTP1/OBG GTP-binding protein family signature 343 361 IPR006073 GO:0005525
Vivi4g05854 496 PRINTS GTP1/OBG GTP-binding protein family signature 326 341 IPR006073 GO:0005525
Vivi4g05854 496 PRINTS GTP1/OBG GTP-binding protein family signature 270 290 IPR006073 GO:0005525
Vivi4g05854 496 PRINTS GTP1/OBG GTP-binding protein family signature 291 309 IPR006073 GO:0005525
Vivi4g05854 496 SUPERFAMILY Obg GTP-binding protein N-terminal domain 72 264 IPR036726 -
Vivi4g05854 496 ProSitePatterns GTP1/OBG family signature. 328 341 IPR006074 GO:0005525
Vivi4g05854 496 NCBIfam small GTP-binding protein domain 269 404 IPR005225 GO:0005525
Vivi4g05854 496 Gene3D GTP1/OBG domain 71 266 IPR036726 -
Vivi4g05854 496 ProSiteProfiles Obg domain profile. 70 267 IPR006169 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05854 - - aprc:113846583 710.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05854 4 195087847 195092895 Vivi4g05854 4 195087847 195092895 ECH