Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05853 ATGGAAGTTGATCCTCACAACTACGATGACATTTCTATAAATGAAAAAGATGTCCCCAACATTGTTCTCTCATACCTTATACATAACTGCTATGAAGAATCCGCAGAGTCGTTCATTGCCGGAGCTGGGACGACGCGGCCGACAGATTATTTGGATAACATGGAGAAAAGAAAAGAAATCATTCACTATGCAATGGAGGGAAATGCACTTAAGGCTATTGAGCTAACTGAGCAGCTGACACCAGAAATTCTGGAGAAGAATAAGGACTTGCTATTTGACCTTTTAAGTCTTCATTTTGTAGAGCTTGTCCGTTCTAAGAAATGCACAGAAGCTTTGGAGTTTGCTCAGACCAAGTTGAGCCCTTTTGGAAAGGAGACAAAATATATGGAAAAACTTGAAGATTTTATGGCCCTTCTTGCTTATAAGGAGCCAGAAAATTCTCCAATGTTTCATTTACTTAGCTTGGATTATCGTCAAGAGTTTGCAGATAATTTGAATCGAACTATCCTTGCATACTTTAACCTTCCCAGCTACACAGCAATGGAGAGGCTTGCACAGCAGGCGACAGTAGTTAGACAATGCTTAAACGAGGTATCTGGAAAGGACGGGCCTCGACCATTTTCTTTGAAAGAATTTCTTAAAAGGCGATGA 651 0.404 MEVDPHNYDDISINEKDVPNIVLSYLIHNCYEESAESFIAGAGTTRPTDYLDNMEKRKEIIHYAMEGNALKAIELTEQLTPEILEKNKDLLFDLLSLHFVELVRSKKCTEALEFAQTKLSPFGKETKYMEKLEDFMALLAYKEPENSPMFHLLSLDYRQEFADNLNRTILAYFNLPSYTAMERLAQQATVVRQCLNEVSGKDGPRPFSLKEFLKRR 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05853 216 Pfam CTLH/CRA C-terminal to LisH motif domain 54 191 IPR024964 -
Vivi4g05853 216 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 53 110 IPR006595 -
Vivi4g05853 216 PANTHER RAN BINDING PROTEIN 9-RELATED 9 199 - -
Vivi4g05853 216 SMART ctlh 53 110 IPR006595 -
Vivi4g05853 216 SMART toby_final6 106 201 IPR013144 -
Vivi4g05853 216 ProSiteProfiles LIS1 homology (LisH) motif profile. 14 46 IPR006594 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05853 K23338 - gmx:100800484 335.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05853 4 195051674 195054464 Vivi4g05853 4 195051674 195054464 ECH
Vivi4g05853 4 195051674 195054464 Vivi4g05853 4 195051674 195054464 PCT