Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05845 ATGTCTTTCATCAAACTCATTCTTTTTCTAACATTTTTCCTCTCTGTTACATTCTCTCATGCTCATCCTCCAGGCTTCAACTTTGGCTGGGGTGGTCAGCATCATCATGGTGGAATGTCCTTTGGTCTTTCTCCTCAATTCTATCAGTTTTCATGTCCTCAAGCTAATGACATTGTCATGTCAGTCCTCGAGAAGGCCATTGCTAAGGATATCAGAATCGCCGCTTCTCTTCTCCGACTTCACTTCCACGATTGCTTCGTCCAAGGTTGTGACGCGTCGGTTTTGTTGGATGATAGTGCGACGATTGCTAGTGAAAAAAATGGCGGGCCTAATAAAAATTCCCTCCGAGGTTTTCAAGTGATTGATGAGATCAAATCTAAATTGGAGCAAACATGTCCTCATACAGTCTCTTGTGCAGACATTGTTGCACTTGCTGCCAGAGGATCCACTGTCCTTAGTGGAGGACCTAATTGGGAGCTACCATTAGGAAGGAGAGACTCAAAAACAGCGAGCCTAAGAGGTTCAAACAAAAACATTCCTCCGCCAAATGCCACGATTGAAGGACTCTTAACATTTTTCAAGCGTCAAGGCCTTGATGAAGTAGACCTTGTCGCCCTCTCAGGTGCACATACAATTGGTGTAGCAAAATGTGCAACATTCAAGCAAAGACTATACAACCAAAATGGAAACAACCAACCTGATGAAAATCTGGAAAAAACATTTTACTTTGGTTTGAAAACAATGTGTCCAAAATCAGGTGGTGACAACAACATTTCTCCATTGGACTTTGGTTCTCCAAGAATGTTTGATAACACATATTTCAAACTCTTACTTAGAGGAAAAGGATTACTTAATTCAGATGAAGTGCTTGTCACTGGAAATGTTAGAGAAACTCATGAACTGGTGAAGAAATATGCACAAGATGAGAGTCTCTTCTTTGAGCAATTTGCATTGTCGATGATCAAGTTGGGAAATCTTCGTCCTCTTACTGGATTTAATGGTGAAGTTCGCAAGAATTGTCGTCGAGTTAATTAA 1035 0.4106 MSFIKLILFLTFFLSVTFSHAHPPGFNFGWGGQHHHGGMSFGLSPQFYQFSCPQANDIVMSVLEKAIAKDIRIAASLLRLHFHDCFVQGCDASVLLDDSATIASEKNGGPNKNSLRGFQVIDEIKSKLEQTCPHTVSCADIVALAARGSTVLSGGPNWELPLGRRDSKTASLRGSNKNIPPPNATIEGLLTFFKRQGLDEVDLVALSGAHTIGVAKCATFKQRLYNQNGNNQPDENLEKTFYFGLKTMCPKSGGDNNISPLDFGSPRMFDNTYFKLLLRGKGLLNSDEVLVTGNVRETHELVKKYAQDESLFFEQFALSMIKLGNLRPLTGFNGEVRKNCRRVN 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05845 344 Gene3D Peroxidase, domain 2 180 324 - -
Vivi4g05845 344 PRINTS Plant peroxidase signature 135 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi4g05845 344 PRINTS Plant peroxidase signature 276 293 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi4g05845 344 PRINTS Plant peroxidase signature 116 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi4g05845 344 PRINTS Plant peroxidase signature 52 71 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi4g05845 344 PRINTS Plant peroxidase signature 201 213 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi4g05845 344 PRINTS Plant peroxidase signature 76 96 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi4g05845 344 PRINTS Plant peroxidase signature 260 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi4g05845 344 PRINTS Plant peroxidase signature 318 331 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi4g05845 344 PRINTS Plant peroxidase signature 154 169 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi4g05845 344 FunFam Peroxidase 46 186 - -
Vivi4g05845 344 SUPERFAMILY Heme-dependent peroxidases 42 344 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vivi4g05845 344 ProSitePatterns Peroxidases proximal heme-ligand signature. 202 212 IPR019793 -
Vivi4g05845 344 Pfam Peroxidase 61 308 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi4g05845 344 CDD secretory_peroxidase 42 343 IPR033905 GO:0004601|GO:0042744
Vivi4g05845 344 ProSitePatterns Peroxidases active site signature. 74 85 IPR019794 GO:0004601
Vivi4g05845 344 FunFam Peroxidase 180 323 - -
Vivi4g05845 344 Gene3D - 47 344 - -
Vivi4g05845 344 PANTHER PEROXIDASE 72-RELATED 42 343 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi4g05845 344 PRINTS Haem peroxidase superfamily signature 202 217 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi4g05845 344 PRINTS Haem peroxidase superfamily signature 136 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi4g05845 344 PRINTS Haem peroxidase superfamily signature 74 88 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi4g05845 344 PRINTS Haem peroxidase superfamily signature 262 277 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi4g05845 344 PRINTS Haem peroxidase superfamily signature 154 166 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi4g05845 344 ProSiteProfiles Plant heme peroxidase family profile. 42 344 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05845 Vivi-Chr4 194911221 194913063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05845 6 344 Peroxidase AT1G44970 72.353 0.0 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05845 K00430 - gmx:100795020 599.356