Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05837 ATGGCCACTTCTAGTGGAAACTCTAGTGTGTCCACAAAATCTCAAAGCTATGGCTCTGAGGAAGATTTGGAAAATTTGAAGCTTTTGATGGATCAAAGAAAGAGGAAGAGAAAACAATCGAACCGCGAATCGGCGAGAAGATCGAGAATGAGGAAGCAGAAGCATATGGATGATTTAGTTGTTGAAGTTGAAAGACTAAGAAATGAAAACAATGAAATGGTGACAAGGATGAACATGTCAACACAACATTATTTGAAAATTGAGGCTGAGAATTGTGTTCTAAGAGCTCAAATGTGTGAACTTAATCAAAGGCTACAATCATTGAATGATATCATCAACATGATGAACACAACAACAACAACAATTTCTGAAGTTAATTATCCAAACAATGATTGTTTTTTAACAATTGCTGATAATTGCTTCATGAATCAAATCAACAACATGTCATATCTTAACCAATTGCCAATTATGGCATCTGCAGATATGTTTATGTGGTGA 498 0.3494 MATSSGNSSVSTKSQSYGSEEDLENLKLLMDQRKRKRKQSNRESARRSRMRKQKHMDDLVVEVERLRNENNEMVTRMNMSTQHYLKIEAENCVLRAQMCELNQRLQSLNDIINMMNTTTTTISEVNYPNNDCFLTIADNCFMNQINNMSYLNQLPIMASADMFMW 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05837 165 FunFam BZIP transcription factor 31 82 - -
Vivi4g05837 165 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 36 51 IPR004827 GO:0003700|GO:0006355
Vivi4g05837 165 Pfam bZIP transcription factor 33 90 IPR004827 GO:0003700|GO:0006355
Vivi4g05837 165 SUPERFAMILY Leucine zipper domain 33 85 IPR046347 GO:0003700|GO:0006355
Vivi4g05837 165 CDD bZIP_plant_GBF1 34 84 IPR045314 GO:0003700|GO:0006355
Vivi4g05837 165 MobiDBLite consensus disorder prediction 1 21 - -
Vivi4g05837 165 Gene3D - 31 86 - -
Vivi4g05837 165 Coils Coil 23 43 - -
Vivi4g05837 165 MobiDBLite consensus disorder prediction 32 49 - -
Vivi4g05837 165 PANTHER BZIP TRANSCRIPTION FACTOR 44 11 161 - -
Vivi4g05837 165 Coils Coil 49 76 - -
Vivi4g05837 165 SMART brlzneu 29 93 IPR004827 GO:0003700|GO:0006355
Vivi4g05837 165 MobiDBLite consensus disorder prediction 1 57 - -
Vivi4g05837 165 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 31 78 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05837 Vivi-Chr4 194853703 194855098 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05837 29 165 bZIP Transcription Factor Family AT4G34590 52.899 5.58e-42 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi4g05837 bZIP_1 8.5e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05837 K25786 - cave:132189566 163.31