Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05807 ATGTTGGTCAACACCAGTGCTACAACTCCAATCTGTTGTGAAGTCAAGGTGCACCGTTCAATATGCATAGAGCTTCAAGGTTTCATTGATAGAATTTTGCATGTTATATTATCCATTGAATCTGCAAGACCAAATTGTGCCTTAGCAATTCAAACACTGTGCTCTTTGCACTTCACTTTGGATAAAGCCAAGTTAGTTATCAAACACTGTTCTGAGTCCAGTAAACTCTACCTGGCAATAACATCACAGAAGATAGTTTCAAGATGTGAAAAGATAAGAATCTCTTTTGAGTTGTACTTGGATCAGATTCAAAATACTGTTCCAATTCCATTAGCTTCTGAGATATGTGCAATACTAGAGGATCTAAGGGGCACAAAATTTTCATTGGAAATTGAAGATGAAACTAGGAAAGTTTTACTTTCACTACTCGAGAAGGAATTTCCAGATTCAACTTCTAAAGAGAAAGCAGAACTTGAAGCTATTCAAGTTGCAGCTTTGAAGTTGGATATTAAGTCTTCAATCTCTCTCTTAGAGGAGAAAGAAAATCTTAAGAAGCAAATTGAAAAAGTCAAGAAGACAAACCAAAAGGAGAAGGAGCTTCTAGAATACCTTTTGTATTTGTTGATTAAATATGAGAATTTTATTTGA 648 0.3488 MLVNTSATTPICCEVKVHRSICIELQGFIDRILHVILSIESARPNCALAIQTLCSLHFTLDKAKLVIKHCSESSKLYLAITSQKIVSRCEKIRISFELYLDQIQNTVPIPLASEICAILEDLRGTKFSLEIEDETRKVLLSLLEKEFPDSTSKEKAELEAIQVAALKLDIKSSISLLEEKENLKKQIEKVKKTNQKEKELLEYLLYLLIKYENFI 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05807 215 Coils Coil 173 200 - -
Vivi4g05807 215 Gene3D - 7 107 IPR036537 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05807 Vivi-Chr4 194475496 194476849 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05807 16 184 U-box Gene Family AT4G36550 40.588 1.67e-34 127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05807 4 194475496 194476849 Vivi4g05807 4 194475496 194476849 ECH