Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05740 ATGGCTCTAAATCCAAACTCAAAAGCCTTTCTTCTCTTCAACATGCTCTTCCTATTAGGTAATATAGCATCTGCTGCTACCGTATTTACCATACAAAACCAATGCAGTTACACAATTTGGCCAGGAACACTTTCAGGCAACGGCGCCGCCATTCTCGGTAAAGGTGGTTTTTCGTTAGCACCCGGTGCATCGGTTAACCTAACTGCACCGTCGGGCTGGTCCGGACGTTTCTGGGCTCGGACTGGTTGTAAATTCGACGGTGCAGGCCATGGACAATGTACCACCGGGAATTGTCCTGGTGGACTAAATTGCATAGGAGGAGGTACTCCACCAGTGACATTGGCGGAATTCACTATCGGATCAGCCGGTAACGGCGGTAAGGACTTCTACGACGTGAGTTTGGTGGACGGTTACAATGTGGGAGTGGGCATATGGGCTAACGGAGGAACCGGTGACTGCCAATATGCGGGGTGTGTTGCCGATTTGAACAATGTTTGTCCGAGGGAACTTAGGGTGAGGGGTGGTGGTGGTGGTGGTGGCGGTTCGGTTGTGGCGTGTAAGAGCGCGTGTTTGGCGTTTAATACGGAGGAATTTTGTTGCACCGGTGAACATTCGACGCCGGAGACATGTTCGGCAACACGGTATTCGGAGATATTTAAGAAAGCATGTCCAACTGCGTACAGTTATGCTTATGATGATGCTTCAAGCACTTTCACATGTTCTGGTTCTAGTTATCGTATCACGTTTTGCCCCAGAGGATCATCGTGA 768 0.4987 MALNPNSKAFLLFNMLFLLGNIASAATVFTIQNQCSYTIWPGTLSGNGAAILGKGGFSLAPGASVNLTAPSGWSGRFWARTGCKFDGAGHGQCTTGNCPGGLNCIGGGTPPVTLAEFTIGSAGNGGKDFYDVSLVDGYNVGVGIWANGGTGDCQYAGCVADLNNVCPRELRVRGGGGGGGGSVVACKSACLAFNTEEFCCTGEHSTPETCSATRYSEIFKKACPTAYSYAYDDASSTFTCSGSSYRITFCPRGSS 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05740 255 PANTHER OS03G0233200 PROTEIN 15 251 IPR001938 -
Vivi4g05740 255 PIRSF PR5 2 255 IPR001938 -
Vivi4g05740 255 CDD TLP-PA 28 250 - -
Vivi4g05740 255 Pfam Thaumatin family 33 251 IPR001938 -
Vivi4g05740 255 Gene3D Thaumatin 27 251 IPR037176 -
Vivi4g05740 255 SMART tha2 29 251 IPR001938 -
Vivi4g05740 255 PRINTS Pathogenesis-related protein signature 76 87 IPR001938 -
Vivi4g05740 255 PRINTS Pathogenesis-related protein signature 241 250 IPR001938 -
Vivi4g05740 255 PRINTS Pathogenesis-related protein signature 28 40 IPR001938 -
Vivi4g05740 255 PRINTS Pathogenesis-related protein signature 89 118 IPR001938 -
Vivi4g05740 255 SUPERFAMILY Osmotin, thaumatin-like protein 28 252 IPR037176 -
Vivi4g05740 255 ProSiteProfiles Thaumatin family profile. 26 253 IPR001938 -
Vivi4g05740 255 FunFam Thaumatin-like protein 1a 27 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05740 Vivi-Chr4 193786577 193787774 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05740 7 255 Receptor kinase-like Gene Family AT5G38280 43.701 4.21e-60 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05740 - - psat:127092035 463.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05740 4 193786577 193787774 Vivi4g05740 4 193786577 193787774 ECH