Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05738 ATGTACAAGAACCACAAAGTAACAACACAGAAACATAAAAGAAAGAAGAAAATTAATAAACTCTCTCAAGAAGGGAGATTATTGCAGAAGATGGAAGTTTGCGTGCCTCTCAAATCCGATAATAGATTAAAGCACCGTCCTTTGACTGTTCTTAGGTTTATAAGGGGTGTGATATGTTTGGTGGTGTTTCTTTCAACTGCTTTCATGTGTTTAGTATACCTTTCGCCGCTTGCAGTTGTAGGGTTGCGGCTTTTCAGTGTTCGTTATAGTAGGAAGGCGGTTTCGTTCTTTTTTGGACTTTGGTTATCGATGTGGCCGTTTCTTTTTGAAAAGATAAATAAGACTAAAGTTGTGTTTTCTGGGGATAGTATTCCGATGAGGGAACGTGTGTTGCTTATTGCCAATCATAGAACTGAGGTTGATTGGATGTATTTGTGGGATCTTGCGCTTCGAAAGGGAAGACTAGGGTTTATAAAATATATCCTTAAGAGTAGCTTGATGAAACTGCCGATTTTCGGTTGGGGGTTTCAGATTCTGGAATTCATTGCAGTGGAGAGGAGGTGGGAGATAGATGAGAAAATATTGCAACAAAATCTTTCAACATTTCAGGATCCCAAAGATCCTTTATGGCTATCTATTTTTCCTGAAGGAACCGATTATACTGAGAAGAAGTGTAAAAGTAGTCAAAAGTTTGCTGCTGAAGTTGGGCTTCCGGTGCTGACAAATGTATTACTTCCAAAAACAAAGGGGTTTCACACTTGCTTGGAAGCTCTACGAGGCTCATTGGATGCAGTATATGACGTGACAATTGCATACAAGAATCAGTGTCCTTCCTTTCTGGACAACGTTTTTGGTCTTGATCCTTCAGAAGTACATATGCATATTCGTCGCATTCCTGTAGATGAGATTCCAGTTTCTGAAACAAAAGCTGCTTCTTGGCTAATGAATACATTCCAAATCAAGGACCAACTGCTCTCTGATTTCAAGATTCAAGGCCATTTCCCTAACCCACAAAATGAAGAGGGAATCTCTACATTCAAGTGCCTTCTCACTTTGACCTTGATAGTTTCTTTTACTGCCCTGTTTACTTATTTTACATTTTTTTCTCATATCGGCTTCAAGTTGTATGTAGGTCTATCTTGTGCATATCTTTCTATTGCAACGCGCTACAAAATTCAATTGATGCCTTTAACAGATTATGTTCATGCATTCTATAACAACAAGAAACAAAAGAATGTATAG 1242 0.3849 MYKNHKVTTQKHKRKKKINKLSQEGRLLQKMEVCVPLKSDNRLKHRPLTVLRFIRGVICLVVFLSTAFMCLVYLSPLAVVGLRLFSVRYSRKAVSFFFGLWLSMWPFLFEKINKTKVVFSGDSIPMRERVLLIANHRTEVDWMYLWDLALRKGRLGFIKYILKSSLMKLPIFGWGFQILEFIAVERRWEIDEKILQQNLSTFQDPKDPLWLSIFPEGTDYTEKKCKSSQKFAAEVGLPVLTNVLLPKTKGFHTCLEALRGSLDAVYDVTIAYKNQCPSFLDNVFGLDPSEVHMHIRRIPVDEIPVSETKAASWLMNTFQIKDQLLSDFKIQGHFPNPQNEEGISTFKCLLTLTLIVSFTALFTYFTFFSHIGFKLYVGLSCAYLSIATRYKIQLMPLTDYVHAFYNNKKQKNV 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05738 413 Pfam Acyltransferase 120 273 IPR002123 GO:0016746
Vivi4g05738 413 Pfam Acyltransferase C-terminus 284 350 IPR032098 -
Vivi4g05738 413 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 47 388 - -
Vivi4g05738 413 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 66 275 - -
Vivi4g05738 413 CDD LPLAT_LCLAT1-like 106 296 - -
Vivi4g05738 413 SMART plsc_2 130 252 IPR002123 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05738 Vivi-Chr4 193780403 193783591 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05738 31 396 Miscellaneous Gene Families AT1G75020 65.301 0.0 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05738 K13513 - gmx:100808657 652.899