Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05735 ATGAACCTCAAATCCCCAAAATCAAAGCCAAAACTTTTCTTCCTCTTTCTCACCCTCTCCCTCTTTTATCTCCAATCTCAATCACTATCTCCCACCACCACCAAAAACAATGCCTCAAACACAAGAAAAACAATCATCAAAGATCAATTCAAAGAAGCCCCTCAATTCTACAACTCACCAAATTGCCCCATAATCACAGAACCAGACTCAGACACAGACACCGAACACGACACTGACTCATTCATCTGCTCAGAGGAAGCAGTCCATGTCGCAATGACATTAGACACAACATACATCCGAGGCTCCATGGCTGCAATCCTCTCTGTCCTCCAACACTCATCATGTCCACAAAACATCATCTTCCACTTCGTTTGCTCCTCAAACTCCTCACTCCTCCACTCCACAATCTCAACCTCCTTCCCTTACCTCAAATTCCAAGTCTACAATTTCGACGATTCCATCGTTTCAGGACTAATCTCAACCTCAATCCGCTCCGCCCTCGATTGTCCCTTAAACTACGCAAGAAGCTACTTGGCGAATCTAATCCCACTCTGCGTTAGAAAAATCGTCTACCTAGATTCAGACCTTATATTAGTCGATGATATCGCGAAACTCGCATCAACGCCATTAGCCGAAAAAAATTCAGTATTGGCAGCACCAGAATACTGCAATGCAAATTTCACATTTTACTTCACCCCGACGTTCTGGTCCAACCCATCCCTGTCCATAACGTTCGCGAACAGAAAGCCTTGTTACTTCAACACCGGAGTCATGGTGATCGATCTAGAGAAATGGCGCGACGGAGATTACACCACGAAGATCGAAGAATGGATGGAACTACAAAAGAGAATGAGAATCTATGAGCTTGGCTCATTGCCGCCGTTTTTGCTTGTTTTCGCAGGCGAAATCGTTGCGGTGGATCATAAGTGGAATCAACATGGACTTGGTGGTGACAATTTTAGAGGACTTTGTAGAGATCTTCATCCTGGTCCAGTGAGTTTGTTGCATTGGAGTGGAAAAGGGAAGCCATGGGTGAGATTGGATGCTAATAGGCCTTGTCCTTTGGATGCTCTTTGGGCACCTTATGATCTTTTGCAAACACCATTTTCTTTTGATTCTTGA 1122 0.4447 MNLKSPKSKPKLFFLFLTLSLFYLQSQSLSPTTTKNNASNTRKTIIKDQFKEAPQFYNSPNCPIITEPDSDTDTEHDTDSFICSEEAVHVAMTLDTTYIRGSMAAILSVLQHSSCPQNIIFHFVCSSNSSLLHSTISTSFPYLKFQVYNFDDSIVSGLISTSIRSALDCPLNYARSYLANLIPLCVRKIVYLDSDLILVDDIAKLASTPLAEKNSVLAAPEYCNANFTFYFTPTFWSNPSLSITFANRKPCYFNTGVMVIDLEKWRDGDYTTKIEEWMELQKRMRIYELGSLPPFLLVFAGEIVAVDHKWNQHGLGGDNFRGLCRDLHPGPVSLLHWSGKGKPWVRLDANRPCPLDALWAPYDLLQTPFSFDS 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05735 373 Pfam Glycosyl transferase family 8 89 346 IPR002495 GO:0016757
Vivi4g05735 373 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 18 366 - -
Vivi4g05735 373 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 89 353 IPR029044 -
Vivi4g05735 373 FunFam Hexosyltransferase 89 353 - -
Vivi4g05735 373 SUPERFAMILY Nucleotide-diphospho-sugar transferases 88 364 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05735 Vivi-Chr4 193728634 193730130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05735 48 369 Glycosyltransferase AT3G50760 72.923 8.61e-177 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05735 K20893 - pop:18104995 578.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05735 4 193728634 193730130 Vivi4g05735 4 193728634 193730130 ECH
Vivi4g05735 4 193728634 193730130 Vivi3g00364 3 6392114 6393807 PCT