Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05715 ATGGCAGTTTCCTTATCATCTCTCACATCTTCCCTCTCTTCACTCTCCTTTTCTTCAAACATCTCTCACAAACCAACCTCTCTTTCTCTGCCCAGAACCTTCTCCATCTCTCGCTCTTCCAAACTCCCCTCCCTAACCGTATCCGCATCAGCACTCGCTCCTCCCGCCGAACCCGAAATCGCTGACCTCAAGAAATACGTGAAATCCAGACTTCCCGGTGGATTCGCCGCTCAAACTATCATCGGCACCGGTCGCCGAAAAACTGCCGTCGCTCGTGTTGTTCTCCAGGAAGGAACCGGCAAATTCGTTATCAATTACCGTGACGCTCAGGAATATTTTCAAGGAAATCCGTTGTGGCTTCAATACATGAAGGTGCCCCTAATAACTTTGGGATATGAAACTAGTTTTGATGTGTTTGTTAAAGCTGAGGGTGGTGGTCTCTCTGGTCAAGCTCAGGCAATCACCCTTGGCATTGCTCGTGCATTGCTGAAGGTTAGCGAAGGTTATAGAGTACCTTTGAGACAGCAAGGGCTTCTCACCAGAGATGCTAGAGCCGTTGAGAGGAAGAAAGTTGGTCTCAAGAAAGCTCGTAAAGCCCCTCAATATTCCAAACGTTGA 618 0.4838 MAVSLSSLTSSLSSLSFSSNISHKPTSLSLPRTFSISRSSKLPSLTVSASALAPPAEPEIADLKKYVKSRLPGGFAAQTIIGTGRRKTAVARVVLQEGTGKFVINYRDAQEYFQGNPLWLQYMKVPLITLGYETSFDVFVKAEGGGLSGQAQAITLGIARALLKVSEGYRVPLRQQGLLTRDARAVERKKVGLKKARKAPQYSKR 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05715 205 Pfam Ribosomal protein S9/S16 84 205 IPR000754 GO:0003735|GO:0005840|GO:0006412
Vivi4g05715 205 FunFam 30S ribosomal protein S9 75 205 - -
Vivi4g05715 205 Hamap 30S ribosomal protein S9 [rpsI]. 75 205 IPR023035 -
Vivi4g05715 205 SUPERFAMILY Ribosomal protein S5 domain 2-like 79 205 IPR020568 -
Vivi4g05715 205 ProSitePatterns Ribosomal protein S9 signature. 144 162 IPR020574 GO:0003735|GO:0005840|GO:0006412
Vivi4g05715 205 PANTHER RIBOSOMAL PROTEIN S9 67 205 IPR000754 GO:0003735|GO:0005840|GO:0006412
Vivi4g05715 205 Gene3D - 71 205 IPR014721 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05715 Vivi-Chr4 193562445 193564686 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05715 K02996 - gmx:100305975 294.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05715 4 193562445 193564686 Vivi4g05715 4 193562445 193564686 ECH