Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05703 ATGTCTCTCCCTTCCTTACTTTGCTCTTTCCAAATTCTCCTAATCATAACTTTCACATATCAAACCAAAGCTGTATACGACGAAATAAACAATTACCACTACTTTTGTGATCAAAGCAACAACAAAGCTAACTACACAGCCAATAGCACCTATCACAAGAACCTCAACACAGTTTTAACCACTCTCACTTCCAACACAGATATCAACTACGGTTTCTACAATTTTTCATTCGGCGAAAACAACGACAGAGTCTATTCAATTGGACTCTGTCGAGGTGATCTGTTGCCGAATGATTGTCGCCGTTGCCTCAGCGGCTCAAGGTCAAATCTCACAAGTATCTGTCCAAATCAAAGAGAAGCAATTTTTTGGTCCGAAGACGAAAGATGTATGTTGCGTTACTCCGACCGGTTAATACTAGGTGTCATGGAAGATGTTCCTATGTTTTATTCAAATAACTTGAATGATTCGGTTGATGTTAATTTGTCAAATGAAGTTGTTACAACTTTGTTGGGTAATTTAACAAGTAAAGCTGTGAAAGGTGATTCTAGGATGAAATATGCTGCTGGAAGTTTACCTGGTCCTAAGTACGAGGTTATCTATGGTTTGGTTCAGTGTACACCTGATTTGTCTGAAAATGATTGCAATTCATGTTTGGTTGAGAATCTTCAACAAATTCCAGGTTGTTGTAAAGGTAAGATTGGTGGAAGGGTTGTTAGGCCTAGTTGTAACATGAGATTTGAAACATCTTATCTTTTTTATGAACCTCGAGCATCACCGCCACCGCCACCGCCGTCTCCTCCACCCAACACCACCGGAAAAAGCAATACGAGTACTACAATTGGCATTGCTGTGGCGGTCCCAGTTGCTATTGTTGGCTTGGTCTTCATTTTGATATGCATCTATTTTAAACTAAGGAAGTCAAAGAAAAAGTTTGAAGAAGTAAAAGAAGAAGAATATCAAGACGACACAATTGAAATATCTGAGCCGTTGCAATTCAACTTCAACACCATATCAAATGCTACAAATGACTTCTTTGTTTCTAATAAACTTGGAGAAGGAGGATTCGGGGTTGTTTACAAAGGTAGGCTTTCCAATGGACAAGAAATTGCTGCCAAAAGGTTGTCGAGGGATTCTGGACAAGGCGATTCCGAATTTAAAAATGAGGTGCTTTTAGTGGCTAAGCTTCAACACCGTAATTTAGTTAGGTTACTCGGCTTCTGTCTAGAAGGAAGAGAAAGAGTACTTGTATATGAGTTTGTTCATAACAAAAGTCTCGATTCTTTCATTTTTGATCAAGCTAAGAGAGCGCAATTATATTGGAAAATACGCTACAAAATAATTTTAGATGAAGAGATGAATCCAAAGATAGCCGATTTTGGAATGGCAAGACTATTTGGTGAAGACCAAACTCAGCAAAACACAAACAAAATTGTGGGAACCTATGGATATATGGCTCCTGAATATGTAATGCATGGACAATTTTCAGTGAAGTCAGATGTGTTCAGTTTTGGTATATTGGTTCTTGAAATTGTTAGTGGTATAAAAAATAGTGGGATTCGTGATGGGGAGAATATAGAGTATCTCTCTAGCTTTGCATGGAGAAATTGGAAAGAGGGGATGACAATGAATATCATTGACCCCGCATTAAATAATGATTCACAAAATGAAATCATGAGATGCATTCATATTGGATTACTTTGCGTTCAAGAGAATATAGCAAGCCGACCATCAATGACTTCTGTTGTGGTAATGCTTAATAGTGATTCTGTCACTCTCCCAATACCTTTGGAACCTGCATTTCATATGGATAATCGAAACTTTCAAGATATTAAGTCATGGGGTCATAGTTCAGCTCAAGAATCAGTCAATGAAACTTCAATTACAGAGTTATATCCTCGCTAA 1902 0.3796 MSLPSLLCSFQILLIITFTYQTKAVYDEINNYHYFCDQSNNKANYTANSTYHKNLNTVLTTLTSNTDINYGFYNFSFGENNDRVYSIGLCRGDLLPNDCRRCLSGSRSNLTSICPNQREAIFWSEDERCMLRYSDRLILGVMEDVPMFYSNNLNDSVDVNLSNEVVTTLLGNLTSKAVKGDSRMKYAAGSLPGPKYEVIYGLVQCTPDLSENDCNSCLVENLQQIPGCCKGKIGGRVVRPSCNMRFETSYLFYEPRASPPPPPPSPPPNTTGKSNTSTTIGIAVAVPVAIVGLVFILICIYFKLRKSKKKFEEVKEEEYQDDTIEISEPLQFNFNTISNATNDFFVSNKLGEGGFGVVYKGRLSNGQEIAAKRLSRDSGQGDSEFKNEVLLVAKLQHRNLVRLLGFCLEGRERVLVYEFVHNKSLDSFIFDQAKRAQLYWKIRYKIILDEEMNPKIADFGMARLFGEDQTQQNTNKIVGTYGYMAPEYVMHGQFSVKSDVFSFGILVLEIVSGIKNSGIRDGENIEYLSSFAWRNWKEGMTMNIIDPALNNDSQNEIMRCIHIGLLCVQENIASRPSMTSVVVMLNSDSVTLPIPLEPAFHMDNRNFQDIKSWGHSSAQESVNETSITELYPR 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05703 633 ProSiteProfiles Gnk2-homologous domain profile. 144 251 IPR002902 -
Vivi4g05703 633 ProSitePatterns Protein kinases ATP-binding region signature. 350 372 IPR017441 GO:0005524
Vivi4g05703 633 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 30 138 - -
Vivi4g05703 633 Gene3D - 147 250 IPR038408 -
Vivi4g05703 633 Gene3D - 32 137 IPR038408 -
Vivi4g05703 633 Pfam Protein tyrosine and serine/threonine kinase 347 441 IPR001245 GO:0004672|GO:0006468
Vivi4g05703 633 Pfam Protein tyrosine and serine/threonine kinase 446 584 IPR001245 GO:0004672|GO:0006468
Vivi4g05703 633 MobiDBLite consensus disorder prediction 255 276 - -
Vivi4g05703 633 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 37 448 - -
Vivi4g05703 633 FunFam Cysteine-rich receptor-like protein kinase 10 146 251 - -
Vivi4g05703 633 SUPERFAMILY Protein kinase-like (PK-like) 328 617 IPR011009 -
Vivi4g05703 633 ProSiteProfiles Gnk2-homologous domain profile. 33 138 IPR002902 -
Vivi4g05703 633 MobiDBLite consensus disorder prediction 255 270 - -
Vivi4g05703 633 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 465 590 - -
Vivi4g05703 633 Gene3D Transferase(Phosphotransferase) domain 1 422 591 - -
Vivi4g05703 633 Gene3D Phosphorylase Kinase; domain 1 304 419 - -
Vivi4g05703 633 Pfam Salt stress response/antifungal 36 135 IPR002902 -
Vivi4g05703 633 Pfam Salt stress response/antifungal 165 248 IPR002902 -
Vivi4g05703 633 FunFam Cysteine-rich receptor-like protein kinase 10 305 419 - -
Vivi4g05703 633 ProSiteProfiles Protein kinase domain profile. 344 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05703 Vivi-Chr4 193410624 193417820 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05703 25 633 Receptor kinase-like Gene Family AT4G21410 44.078 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi4g05703 PK_Tyr_Ser-Thr 1.8e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05703 - - gmx:113000774 711.449