Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05702 ATGTCTCTCCCTTCCTTACTTTGCTCTTTCCAAATTCTCCTAATCATAACTTTCACATATCAAACCAAAGCTGTATACGACGAAATAAACAATTACCACTACTTTTGTGATCAAAGCAACAACAAAGCTAACTACACAGCCAATAGCACCTATCACAAGAACCTCAACACAGTTTTAACCACTCTCACTTCCAACACAGATATCAACTACGGTTTCTACAATTTTTCATTCGGCGAAAACAACGACAGAGTCTATTCAATTGGACTCTGTCGAGGTGATCTGTTGCCGAATGATTGTCGCCGTTGCCTCAGCGGCTCAAGGTCAAATCTCACAAGTATCTGTCCAAATCAAAGAGAAGCAATTTTTTGGTCCGAAGACGAAAGATGTATGTTGCGTTACTCCGACCGGTTAATACTAGGTGTCATGGAAGATGTTCCTATGTTTTATTCAAATAACTTGAATGATTCGGTTGATGTTAATTTGTCAAATGAAGTTGTTACAACTTTGTTGGGTAATTTAACAAGTAAAGCTGTGAAAGGTGATTCTAGGATGAAATATGCTGCTGGAAGTTTACCTGGTCCTAAGTACGAGGTTATCTATGGTTTGGTTCAGTGTACACCTGATTTGTCTGAAAATGATTGCAATTCATGTTTGGTTGAGAATCTTCAACAAATTCCAGGTTGTTGTAAAGGTAAGATTGGTGGAAGGGTTGTTAGGCCTAGTTGTAACATGAGATTTGAAACATCTTATCTTTTTTATGAACCTCGAGCATCACCGCCACCGCCACCGCCGTCTCCTCCACCCAACACCACCGGAAAAAGCAATACGAGTACTACAATTGGCATTGCTGTGGCGGTCCCAGTTGCTATTGTTGGCTTGGTCTTCATTTTGATATGCATCTATTTTAAACTAAGGAAGTCAAAGAAAAAGTTTGAAGTAAAAGAAGAAGAATATCAAGACGACACAATTGAAATATCTGAGCCGTTGCAATTCAACTTCAACACCATATCAAATGCTACAAATGACTTCTTTGTTTCTAATAAACTTGGAGAAGGAGGATTCGGGGTTGTTTACAAAGGTAGGCTTTCCAATGGACAAGAAATTGCTGCCAAAAGGTTGTCGAGGGATTCTGGACAAGGCGATTCCGAATTTAAAAATGAGGTGCTTTTAGTGGCTAAGCTTCAACACCGTAATTTAGTTAGGTTACTCGGCTTCTGTCTAGAAGGAAGAGAAAGAGTACTTGTATATGAGTTTGTTCATAACAAAAGTCTCGATTCTTTCATTTTTGATCAAGCTAAGAGAGCGCAATTATATTGGAAAATACGCTACAAAATAATTTTAGGTATTGCTCGAGGCATTCTTTATCTCCATGAAGATTCTCGACTACGCATTATTCATCGTGATCTTAAAGCAAGTAATATTCTCTTAGATGAAGAGATGAATCCAAAGATAGCCGATTTTGGAATGGCAAGACTATTTGGTGAAGACCAAACTCAGCAAAACACAAACAAAATTGTGGGAACCTATGGATATATGGCTCCTGAATATGTAATGCATGGACAATTTTCAGTGAAGTCAGATGTGTTCAGTTTTGGTATATTGGTTCTTGAAATTGTTAGTGGTATAAAAAATAGTGGGATTCGTGATGGGGAGAATATAGAGTATCTCTCTAGCTTTGCATGGAGAAATTGGAAAGAGGGGATGACAATGAATATCATTGACCCCGCATTAAATAATGATTCACAAAATGAAATCATGAGATGCATTCATATTGGATTACTTTGCGTTCAAGAGAATATAGCAAGCCGACCATCAATGACTTCTGTTGTGGTAATGCTTAATAGTGATTCTGTCACTCTCCCAATACCTTTGGAACCTGCATTTCATATGGATAATCGAAACTTTCAAGATATTAAGTCATGGGGTCATAGTTCAGCTCAAGAATCAGTCAATGAAACTTCAATTACAGAGTTATATCCTCGCTAA 1986 0.3792 MSLPSLLCSFQILLIITFTYQTKAVYDEINNYHYFCDQSNNKANYTANSTYHKNLNTVLTTLTSNTDINYGFYNFSFGENNDRVYSIGLCRGDLLPNDCRRCLSGSRSNLTSICPNQREAIFWSEDERCMLRYSDRLILGVMEDVPMFYSNNLNDSVDVNLSNEVVTTLLGNLTSKAVKGDSRMKYAAGSLPGPKYEVIYGLVQCTPDLSENDCNSCLVENLQQIPGCCKGKIGGRVVRPSCNMRFETSYLFYEPRASPPPPPPSPPPNTTGKSNTSTTIGIAVAVPVAIVGLVFILICIYFKLRKSKKKFEVKEEEYQDDTIEISEPLQFNFNTISNATNDFFVSNKLGEGGFGVVYKGRLSNGQEIAAKRLSRDSGQGDSEFKNEVLLVAKLQHRNLVRLLGFCLEGRERVLVYEFVHNKSLDSFIFDQAKRAQLYWKIRYKIILGIARGILYLHEDSRLRIIHRDLKASNILLDEEMNPKIADFGMARLFGEDQTQQNTNKIVGTYGYMAPEYVMHGQFSVKSDVFSFGILVLEIVSGIKNSGIRDGENIEYLSSFAWRNWKEGMTMNIIDPALNNDSQNEIMRCIHIGLLCVQENIASRPSMTSVVVMLNSDSVTLPIPLEPAFHMDNRNFQDIKSWGHSSAQESVNETSITELYPR 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05702 661 MobiDBLite consensus disorder prediction 255 276 - -
Vivi4g05702 661 Pfam Protein tyrosine and serine/threonine kinase 346 612 IPR001245 GO:0004672|GO:0006468
Vivi4g05702 661 FunFam Cysteine-rich receptor-like protein kinase 10 146 251 - -
Vivi4g05702 661 CDD STKc_IRAK 349 614 - -
Vivi4g05702 661 Gene3D - 32 137 IPR038408 -
Vivi4g05702 661 Gene3D - 147 250 IPR038408 -
Vivi4g05702 661 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 37 659 - -
Vivi4g05702 661 FunFam Cysteine-rich receptor-like protein kinase 10 305 418 - -
Vivi4g05702 661 ProSiteProfiles Gnk2-homologous domain profile. 33 138 IPR002902 -
Vivi4g05702 661 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 30 138 - -
Vivi4g05702 661 Pfam Salt stress response/antifungal 165 248 IPR002902 -
Vivi4g05702 661 Pfam Salt stress response/antifungal 36 135 IPR002902 -
Vivi4g05702 661 ProSiteProfiles Protein kinase domain profile. 343 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g05702 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
Vivi4g05702 661 ProSiteProfiles Gnk2-homologous domain profile. 144 251 IPR002902 -
Vivi4g05702 661 SUPERFAMILY Protein kinase-like (PK-like) 321 613 IPR011009 -
Vivi4g05702 661 Gene3D Phosphorylase Kinase; domain 1 303 418 - -
Vivi4g05702 661 Gene3D Transferase(Phosphotransferase) domain 1 419 619 - -
Vivi4g05702 661 MobiDBLite consensus disorder prediction 255 270 - -
Vivi4g05702 661 FunFam Cysteine-rich receptor-like protein kinase 28 419 621 - -
Vivi4g05702 661 SMART serkin_6 343 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g05702 661 ProSitePatterns Protein kinases ATP-binding region signature. 349 371 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05702 Vivi-Chr4 193410623 193417821 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05702 25 661 Receptor kinase-like Gene Family AT4G21410 48.338 0.0 603
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi4g05702 PK_Tyr_Ser-Thr 2.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05702 - - lang:109335396 785.793