Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05701 ATGGTTATGCCTATTTCTTCCTTACTTTTCTCTCTCCAAATCCTCCTAATCATAACTTTCACATATCAAACCAAAGCTGTATACGACGAAATAAACAATTACCACTACTTTTGTGATCAAAGCAACAACAAAGCTAACTACACAGCCAATAGCACCTATCACAAGAACCTCAACACACTCTTAACCACTCTCACTTCCAACACAGATATCAACTACGGTTTCTACAATTTTTCATTTGGCGAAAACAACGACAGAGTCTATTCAATTGGACTCTGTCGAGGGGATCTTTTGACGAATGACTGTCGCAGTTGCCTCAGCGGCTCAAGAGACAATCTCACAAGCGTTTGTCCAAATCAAAGAGAAGCAATTTTTTGGTCTCAAAACGAAAGATGTATGTTGCGTTACTCCGACCGATTAATATTTGGTATCATGGAAGATGTTCCTACGTTTCATTCAAATAACGAAAATGATTCAGTTGATGTTAATTTGTCTAATGAAGATGTTACAACTTTGTTGAATAATTTAACAAGTAAAGCAGTGAAAGGTGATTCTAGGATGAAATATGCTGCTGATAGTTTACCTGGTCCTTCGGTCGAGACTATATATGGTTTGGTTCAGTGTACACCTGATTTGTCTGAAACTAAGTGCAATTCATGTTTGGTTGAGAGTCTTCAACAAATTCCAAGTTGTTGTAAGGGTAAGATTGGTGGAAGAGTTGTTAGGCCTAGTTGTAATATGAGATTTGAAACATCTTATGAATTTTATGATACTAGTCCTACAGCATCATCATCATCGCCGCCGCCACCGTCAGCACTGTCTCCTCCACCCAACACCACAGGAAAAAGTAATAAGAGTAGTACAATTGGCATTGTTGTGGCGGTCCCAGTTGCTATTGTTGCTTTGGTCTTCATTTTTCTATGCGTCTATTTTAAAAGAAGGAAGTCAAAGAAAAGGTTTGAAGAAATTCAAGAAGAAGATCAAGACGACAAAATTGAAATATTTGAGTCACTGCAATTCAATGCTACAAATGACTTCATTGTTTCTAATAAACTCGGAGAAGGAGGATTCGGGGTTGTTTACAAGGGTCAGCTTTCCAATGGACAAGAGATAGCTGTCAAAAGGTTATCAAGAGATTCTGGACAGGGTGATTTGGAGTTTAAAAATGAGGTGCTTTTAGTGGCTAGACTTCAACACCGTAATTTAGTTAGACTACTCGGCTTTTGTCTAGAAGGAGTAGAAAGGTTACTTGTATATGAGTTTGTTCATAACAAAAGTCTCGATTACTTCATTTTTGATCAAGCTAAGAGAGAACAATTGTATTGGGGAATGCGTTACAAAATCATTTTAGGTATTGCTCGAGGAATTCTTTATCTCCATGAAGATTCTCGACTACGTATTATTCACCGTGATCTCAAAGCAAGTAACATTCTCTTAGATGAAGATATGAATCCTAAGATAGCTGATTTTGGCATGGCCAGACTTTTTGGTGTAGACCAAACTCAGGAAAACACAAGAAGAATTGTGGGAACCTATGGATATATGGCACCTGAATATGCAATGCATGGAGAATTTTCAGTGAAGTCGGATGTCTTCAGTTTTGGTATATTGGTTCTTGAAATTGTAAGCGGTATGAAAAATAGTGGTGTTCGTGATGGAGAAAGTATAGAGTACCTCTCAAGCTTTGCATGGAGAAATTGGAGGGACGGGACGATATCAAATACTATAGATCCCACATTACATAATGATTCACAAAATGAAATAATGAGATGCATCCATATTGGATTACTTTGTGTTCAAGAGAATGTAGCAAGCAGACCAACAATGAATTCTGTTGTAGTAATGCTTAACAGTCCTTCTGTCACTCTCCATATTCCTTCAGAACCTGCATTTCATATGGATGTTCAAAACTTTCAAGATATTAGTTCAGCTCAAGAATCAATCAACGAAATTTCAAATACAGAGTTATATCCCCGTTAG 1977 0.3743 MVMPISSLLFSLQILLIITFTYQTKAVYDEINNYHYFCDQSNNKANYTANSTYHKNLNTLLTTLTSNTDINYGFYNFSFGENNDRVYSIGLCRGDLLTNDCRSCLSGSRDNLTSVCPNQREAIFWSQNERCMLRYSDRLIFGIMEDVPTFHSNNENDSVDVNLSNEDVTTLLNNLTSKAVKGDSRMKYAADSLPGPSVETIYGLVQCTPDLSETKCNSCLVESLQQIPSCCKGKIGGRVVRPSCNMRFETSYEFYDTSPTASSSSPPPPSALSPPPNTTGKSNKSSTIGIVVAVPVAIVALVFIFLCVYFKRRKSKKRFEEIQEEDQDDKIEIFESLQFNATNDFIVSNKLGEGGFGVVYKGQLSNGQEIAVKRLSRDSGQGDLEFKNEVLLVARLQHRNLVRLLGFCLEGVERLLVYEFVHNKSLDYFIFDQAKREQLYWGMRYKIILGIARGILYLHEDSRLRIIHRDLKASNILLDEDMNPKIADFGMARLFGVDQTQENTRRIVGTYGYMAPEYAMHGEFSVKSDVFSFGILVLEIVSGMKNSGVRDGESIEYLSSFAWRNWRDGTISNTIDPTLHNDSQNEIMRCIHIGLLCVQENVASRPTMNSVVVMLNSPSVTLHIPSEPAFHMDVQNFQDISSAQESINEISNTELYPR 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05701 658 Gene3D Phosphorylase Kinase; domain 1 307 420 - -
Vivi4g05701 658 MobiDBLite consensus disorder prediction 257 284 - -
Vivi4g05701 658 ProSiteProfiles Gnk2-homologous domain profile. 146 253 IPR002902 -
Vivi4g05701 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Vivi4g05701 658 CDD STKc_IRAK 351 616 - -
Vivi4g05701 658 ProSiteProfiles Gnk2-homologous domain profile. 35 140 IPR002902 -
Vivi4g05701 658 FunFam Cysteine-rich receptor-like protein kinase 28 421 623 - -
Vivi4g05701 658 Gene3D Transferase(Phosphotransferase) domain 1 421 624 - -
Vivi4g05701 658 Gene3D - 34 139 IPR038408 -
Vivi4g05701 658 Gene3D - 148 254 IPR038408 -
Vivi4g05701 658 ProSitePatterns Protein kinases ATP-binding region signature. 351 373 IPR017441 GO:0005524
Vivi4g05701 658 Pfam Protein tyrosine and serine/threonine kinase 348 614 IPR001245 GO:0004672|GO:0006468
Vivi4g05701 658 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 39 638 - -
Vivi4g05701 658 Pfam Salt stress response/antifungal 166 250 IPR002902 -
Vivi4g05701 658 Pfam Salt stress response/antifungal 38 137 IPR002902 -
Vivi4g05701 658 SMART serkin_6 345 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g05701 658 FunFam Cysteine-rich receptor-like protein kinase 10 310 420 - -
Vivi4g05701 658 FunFam Cysteine-rich receptor-like protein kinase 10 148 254 - -
Vivi4g05701 658 ProSiteProfiles Protein kinase domain profile. 345 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g05701 658 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 32 140 - -
Vivi4g05701 658 SUPERFAMILY Protein kinase-like (PK-like) 336 615 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05701 Vivi-Chr4 193394109 193399805 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05701 27 658 Receptor kinase-like Gene Family AT4G21410 48.726 0.0 584
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi4g05701 PK_Tyr_Ser-Thr 1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05701 - - lang:109335396 772.311