Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05673 ATGGCTTCTACTTCCTTTCATTTTTCTCTCTTTCTCCTAATAATAACCATTTTCTCATCATCAAAACTAGCAATCGCAGCAAACAACACACAAAATTTCCACTACTTCTGTGATTTCAACAATAGAGGTAACTTCACAAACAACAGCACTTACCAAACTAACCTCAAAACACTTTTATCATCTCTCACTTCCAACACACAAATCAACTACGGTTTCTACAATTTCTCAAACGGCCAAAACACTAACAAAGTAAACGCAATTGCTCTCTGCAGAGGCGATGTTAAAAACCAAAACGACTGCCTCAGTTGCCTAAAAGCTTCAAGCAACAATCTCACACAGCTTTGTCCAAACCAGAAAGAAGCAATTGGTTGGTACGAAGATGAAAAATGCATGCTGCGTTATTCAGATCGATCCATATTTCGATTATTGGAAACAGGACCTGCTTATTATGCACACAACCTGGCTAACGCAACTGATTTGAGCGTGTTCAATGAAACTGTCCGAAACCTGCTAGATAATTTAACTCAGAGAGCTTCATCTGGTGATTCTAGTTTGAAATATGCTGCTGATAGTGCGCGCGGTCCGAATGATCAAACTATATATGGTTTGGTTCAGTGTACGCCAGATTTGTCTGAATCTGATTGTAGTTCTTGTTTGGATCAGTCTATAGCGCGAATACCGATTGATTGTTGTAAAGATAAGATTGGTGGAAGAGTCGTTAGGCCTAGTTGTAACATGAGATTTGAAACCAATTTTCGATTCTATGTTCCTACAGCAACCCCGCCACCACCTCCTCCTTCCTCCACCAATAATACTTCCTCACCTCCTCCACCAGGAAAAAGCAAAACTACCACAATCATTGCCATAGTAGTATCAGTTGTTGCTATTGTGGTGCTCATTTTAATCTTCATCTATTTAAGAGCAAGGAAGCGAAGTAAAAGACTTAGAATTCAAGAAGAAGAAGAAGAAGATGATGATGATGCTGATGAAATTGAAATTTCGGCGTCATTGCAATTCAAGTTAGATACAATAAGAGATGCAACAAATGACTTTTCTGATCAAAATAAACTAGGACAAGGTGGATTTGGAACTGTTTACAAAGGTACACTCCCCAATGGACAAGAGATTGGTGTCAAGAGGTTGTCAAAGGATTCTGGCCAAGGATATTTAGAATTTAAGAATGAAGTTGTTTTAGTGGCTAAGCTTCAACACCGAAATTTAGTCCGACTACTCGGTTTCTGTATAGAAGGAAGAGAAAGACTGCTTGTATATGAATATGTTCACAATAAGAGTCTTGATTACTTCATTTTTGGTAGGTTTGTCTCTATTTCTTTAGTTGTTATTAAAGACATGGTTCTGACTTCTGAGATTCATATCTCTTTTATATGTTTCTATACAGATGAAACCAAGAGAGCGTGTTTAAATTGGGAAAGGAGGTATAAAATCATTGCAGGTATTGCTCGAGGAATTCTTTACCTTCACGAGGATTCTCGTCTACGCATTATCCATCGTGATCTCAAAGCAAGCAATATTCTCTTAGACGGAGAGATGAATCCAAAGATAGCAGATTTTGGTATGGCTAGACTGTTTGCAGTGGACCAAACTCAAGAGAATACAAATAGAATTGTGGGAACCTATGGATATATGGCACCTGAGTATGCAATGCATGGACAGTTTTCTGTGAAGTCAGACGTATTCAGTTTTGGCGTATTGATTCTTGAGATTATAAGTGGTCACAAAAATAGTGGTGTTCGTCGTGGGGATACTAATGAGTATCTTCTAAGCTTTGTATGGAGAAACTGGCGAGACGGGTCGCCAACAAATATTATAGATCCTACAATAATCAATGATTCAGTAAATGAAGTATTGAGATGCATCCACATTGGGTTACTTTGTGTTCAAGAAAATGCATCTAGCAGACCAACTATGGCTTCTGTAGTACTAATGCTTAATAGCCATTCTCTCAGTCTACCAAGACCTTCGGAACCTGCATTTTATGTAGGTAGTGGAGCTGTAGACTTTCAAGATATAATGATGCAATCATCGGAGCATAACTCAGGTCAGGAATCGATAAATCAGGTTTCCATTACAGAGCTATATCCTCGCTAG 2109 0.385 MASTSFHFSLFLLIITIFSSSKLAIAANNTQNFHYFCDFNNRGNFTNNSTYQTNLKTLLSSLTSNTQINYGFYNFSNGQNTNKVNAIALCRGDVKNQNDCLSCLKASSNNLTQLCPNQKEAIGWYEDEKCMLRYSDRSIFRLLETGPAYYAHNLANATDLSVFNETVRNLLDNLTQRASSGDSSLKYAADSARGPNDQTIYGLVQCTPDLSESDCSSCLDQSIARIPIDCCKDKIGGRVVRPSCNMRFETNFRFYVPTATPPPPPPSSTNNTSSPPPPGKSKTTTIIAIVVSVVAIVVLILIFIYLRARKRSKRLRIQEEEEEDDDDADEIEISASLQFKLDTIRDATNDFSDQNKLGQGGFGTVYKGTLPNGQEIGVKRLSKDSGQGYLEFKNEVVLVAKLQHRNLVRLLGFCIEGRERLLVYEYVHNKSLDYFIFGRFVSISLVVIKDMVLTSEIHISFICFYTDETKRACLNWERRYKIIAGIARGILYLHEDSRLRIIHRDLKASNILLDGEMNPKIADFGMARLFAVDQTQENTNRIVGTYGYMAPEYAMHGQFSVKSDVFSFGVLILEIISGHKNSGVRRGDTNEYLLSFVWRNWRDGSPTNIIDPTIINDSVNEVLRCIHIGLLCVQENASSRPTMASVVLMLNSHSLSLPRPSEPAFYVGSGAVDFQDIMMQSSEHNSGQESINQVSITELYPR 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05673 702 MobiDBLite consensus disorder prediction 256 281 - -
Vivi4g05673 702 Pfam Salt stress response/antifungal 37 136 IPR002902 -
Vivi4g05673 702 Pfam Salt stress response/antifungal 156 250 IPR002902 -
Vivi4g05673 702 FunFam cysteine-rich receptor-like protein kinase 10 454 657 - -
Vivi4g05673 702 CDD STKc_IRAK 357 651 - -
Vivi4g05673 702 Gene3D Phosphorylase Kinase; domain 1 311 426 - -
Vivi4g05673 702 FunFam Cysteine-rich receptor-like protein kinase 10 147 253 - -
Vivi4g05673 702 MobiDBLite consensus disorder prediction 682 702 - -
Vivi4g05673 702 ProSiteProfiles Protein kinase domain profile. 351 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g05673 702 Gene3D Transferase(Phosphotransferase) domain 1 463 657 - -
Vivi4g05673 702 SUPERFAMILY Protein kinase-like (PK-like) 339 667 IPR011009 -
Vivi4g05673 702 ProSitePatterns Serine/Threonine protein kinases active-site signature. 501 513 IPR008271 GO:0004672|GO:0006468
Vivi4g05673 702 Gene3D - 31 138 IPR038408 -
Vivi4g05673 702 Gene3D - 147 252 IPR038408 -
Vivi4g05673 702 FunFam Cysteine-rich receptor-like protein kinase 10 311 426 - -
Vivi4g05673 702 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 30 139 - -
Vivi4g05673 702 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 39 701 - -
Vivi4g05673 702 ProSiteProfiles Gnk2-homologous domain profile. 33 139 IPR002902 -
Vivi4g05673 702 Pfam Protein tyrosine and serine/threonine kinase 354 648 IPR001245 GO:0004672|GO:0006468
Vivi4g05673 702 SMART serkin_6 351 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g05673 702 MobiDBLite consensus disorder prediction 257 273 - -
Vivi4g05673 702 ProSiteProfiles Gnk2-homologous domain profile. 145 253 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05673 Vivi-Chr4 192994369 192998135 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05673 40 702 Receptor kinase-like Gene Family AT4G38830 48.824 0.0 588
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi4g05673 PK_Tyr_Ser-Thr 9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05673 - - var:108324787 779.245