Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05592 ATGCGTGGATTGCAAAAATCGAAGCGAGTTTCATGGGCTTCGGATTTGAATCTTTGTCAGGTTAAGTTATTCTTATCAGAGGAATCTCCTTCACAAGTTGGGTTGAACTCTCAAGATCACCTCCAAGCAAAGACATCATCCGTGTTGTATCAAGGAGAACCTGGTTCTGATGATATTTTGCCTCCTGGATTTGAAGGAACTTGTGCTTCAAGTCAGTTTGACATTAACCTGTCCCAAATACCAGTTATTAGCTGGGTTACTCCACATAAGATCGTGCTAGATGTCACATGGCTAGTGGCGGCTGGGGAAGAAAGCAAAGAGATAATTGATCAACCTCACAGGGAGATGAGAGTCCTTGAGGCTATATATCCAAGAATATCTTCCATTCCTCCAAATCCTTCTGTTCCATTGAACGTTGAAGATTCTCATTACATGGACGATCATACTATTGTGATCCCAATTACGCCCGTTGAAGATGGGGATGTGGCAGCAGAAATATCATCTCATTCCTCAAAACAATATGATGTTTCACAGTCTCATGGGTTATCTTCTGGTATATTTGAGGGTTCAAACTCTGTTACGAGTATGTCTGATGTAGCTGCTGCATCTGTTGCTTTAACTAGCATAGTAAAGAGCAGCGAACATGGTAATTTGATTGACCGTGAATTACTCAATAACATTCTCAACAATCCTGAAGTGATTGAGAAGTTAGTTAGAGATTATGGAGTTCAGAATAATGCACAGTATGTACAAAACACGGGATCATCTTCCGGAGTTTTTTCACAACATCCTACTAATCGCATTAATCAAGTTGAAACGACTACAACCTCGTCAAATCCTTTTTTATCCACTTCTTCCTATGCTCACACAAATGGCGGTCAGATGGCGGCAAATATTCCTACTCAATGGCATTCTAGGTCTGTAATGAGTTCAACTATTGCTGCTACTCCTGTTGACCCCCCTTCAACAAGAGATGTAAACTACTATAAGAGCCTGATTCAACAACATGGAGGCGATAAACAAGAAGCACTTCCATACTCCTCGAATAATCGTCAGAACCAGCAGCCATTATCAAACTATGAGACAGTACACAATTTTAGAGCAAAGGGGTCAAAGCCAAAGATCATGAAGCCTTGTATCTTTTTCAACAGTTCCAGAGGATGTCGGAACGGAACTAACTGTACCTTTCAGCATGATGCATCATTTCAGCAACAAGGTAATCCTGGGTCAGGGATGCAAAGTTCGAAGAGAATGAAAATGGACAACGAGATCAGCAGTTAA 1281 0.4106 MRGLQKSKRVSWASDLNLCQVKLFLSEESPSQVGLNSQDHLQAKTSSVLYQGEPGSDDILPPGFEGTCASSQFDINLSQIPVISWVTPHKIVLDVTWLVAAGEESKEIIDQPHREMRVLEAIYPRISSIPPNPSVPLNVEDSHYMDDHTIVIPITPVEDGDVAAEISSHSSKQYDVSQSHGLSSGIFEGSNSVTSMSDVAAASVALTSIVKSSEHGNLIDRELLNNILNNPEVIEKLVRDYGVQNNAQYVQNTGSSSGVFSQHPTNRINQVETTTTSSNPFLSTSSYAHTNGGQMAANIPTQWHSRSVMSSTIAATPVDPPSTRDVNYYKSLIQQHGGDKQEALPYSSNNRQNQQPLSNYETVHNFRAKGSKPKIMKPCIFFNSSRGCRNGTNCTFQHDASFQQQGNPGSGMQSSKRMKMDNEISS 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05592 426 MobiDBLite consensus disorder prediction 337 356 - -
Vivi4g05592 426 MobiDBLite consensus disorder prediction 341 356 - -
Vivi4g05592 426 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 261 422 - -
Vivi4g05592 426 MobiDBLite consensus disorder prediction 401 426 - -
Vivi4g05592 426 ProSiteProfiles Zinc finger C3H1-type profile. 373 401 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05592 Vivi-Chr4 191468131 191472757 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Vivi4g05592 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05592 - - cam:101501814 674.085