Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05576 ATGGAAAATGGATTACCCTTACTTCATTCTCTCTTACAACATACTCTAAGAACCACATGCTCATTTCCTACTTCTTCATCTTCATCCAAATGGGTCTATGCTGTTTTTTGGAGAGTAGTACCAAGAAACTTTCCTCCACCAAGGTGGGAATTTGGAGGGACTTCTCTTGATCGTTCCAAGGGAAATAAAAGAAATTGGATTATTGTATGGGAAGATGGATTTTGTGATTTTAATGAATGTGAGCAAAGGAAAAATGGATACATGAATGAAAGATTTGGAGCTGAAGTATTCTTCAAAATGTCTCATGAAGTTTATAGTTATGGAGAAGGATTAGTGGGAAAAGTTGCAGCAGATAATGGTCACAAATGGATTTATAGTGACACTCAAAATGGATATGAATCTAACTATACTGGTCCATGGAATGCTTCAATTGATCATCATCAACCAAAGGCATGGGGTGTTCAGTTAAATTCAGGCATTCAGACTATTGCTCTCATTGCTGTCAAAGAAGGCTTAGTACAACTTGGTTCTTTTAACAAGAAAATCACTTTGAAACCACAAGTTGTGTTCAGATTGCAGAAGATCTTGATATAG 594 0.3636 MENGLPLLHSLLQHTLRTTCSFPTSSSSSKWVYAVFWRVVPRNFPPPRWEFGGTSLDRSKGNKRNWIIVWEDGFCDFNECEQRKNGYMNERFGAEVFFKMSHEVYSYGEGLVGKVAADNGHKWIYSDTQNGYESNYTGPWNASIDHHQPKAWGVQLNSGIQTIALIAVKEGLVQLGSFNKKITLKPQVVFRLQKILI 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05576 197 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 2 194 - -
Vivi4g05576 197 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 12 189 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05576 Vivi-Chr4 191243239 191244916 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05576 28 180 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 29.870 3.18e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05576 - - gmx:100807289 316.62