Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05557 ATGGATCCCAATAATCATTTTAACACTCAAAATTCTGCTAATTTTCCATTTAACCAAAATCCCAACAATTTTCAAAATCCCAACAATTATCAAAATCCCAACTATTATCAAAATCCAAATCAATTTTCCAACCAACATCCTCAAAACATACCTAGTTTTGGTTTTCCACCAAATTTCAACCAGTCATCCTCTGTTCCAAACTTTCAACCATATTATGGATCTATGCCGAGAAATCCATCTCAAACACCCCCGTTTAATGGTTATGTGACAATGGCGAATGCAAATTTTCCAAGTGGTGGTGTACCTGAATTTCCCGAGTTTTCAACACAACTAACTATTGGTGGCATGATAGTTTCTAATGAAGTCGCTCCAAATTCAGAGGATTCAACTCCTAAGAGCAGGAAAACTCAGCAACCAGCATGGAACACTGAACAAAATTTGGTGCTAATTAGTGGGTGGATTAAATTTGGAACAAGCAGTGTTGTCGGGAGAAACCAGAAAGGTGAAACATATTGGGGTAAAATTGCTGAGTATTGTAATGAGCATTGCTCATTCGATCCTCCGCGTGATGGACCTGCATGCCGAAACCGTTTTAATTATATGAACAAAGTGTTGGGTAAATGGATTGGCGCTTATGATGGCGCTAAGCGTATGCAAGGAAGTGGTTGGTCGGAGAATGATGTTTTGGCAAAAGCGCAGGAATTATATGCATGTGGGAAGAATGTTAGATTCACTTTAATGGAAGAATGGCACGCTCTCCGTGATCAACCACGTTATGTTAGTCAAGTAGGAGGAAATATTGGCTCAGGAAAGCGTAGAAACAAAATATCGGAAGATAATGCACCTCGTAGTAGAAAATATCTCAATAGAGATCATGCAGCGGCAAACCAAAGACTAATTGACGACTACTTTGCCAATGAGCCTACATATGGCGATGCAATGTTTCGTCGTCGGTACCGGATGAAAAAAAATGTTTTCCTTCGAATCGTTGGGGACCTTTCAAGTAGTGATAACTACTTCACCCAGCGAGTTGATGCAGCCAATAAAGAAGGTATATCACCCTTAGCAAAATGTACCACAGCAATGCGAATGTTAGCATATGGTGTTGCAGCAGATGCGGTCGATGAGTACATCAAAATAGGAGGTACTACAGCATTGGAGTGCTTACGTAGATTCTGTAAAGGAATCATACGCTTGTACGAGCAAGTGTATCTGAGAGCACCAACCCAAGATGACCTGCAAAGAATACTGCATGTTAGTGAAATGCGGGGGTTCCCAGGGATGATTGGGAGTATTGACTGCATGCACTGGGAGTGGAAAAATTGTCCTAAAGCATGGGAAGGACAGTTTACTAGAGGGGATAAGGGAACCACCACAGTTATTCTTGAAGCAGTTGCATCTCATGACCTATGGATCTGGCATGCCTTTTTTGGATGTCCGGGAACGTTGAACGATATAAACGTTCTAGACCGGTCACCAGTGTTTGATGACGTGGAACAGGGAAAGGCTCCAAGTGTGAATTTCTTTGTGAATCAACGTCCATATAATATGGCATACTATCTAGCTGATGGTATCTACCCTTCTTATCCAACTTTCGTCAAATCGATTAGACTTCCTCAAAGTGAACCCGATAAATTATTTGCAAAATTTCAGGAGGGATGTCGGAAGGACATCGAACGTGCATTTGGAGTGCTCCAAGCTCGATTTAAAATCATCCGTGAACCAGCTCGCTTGTGGGACATAGCTGATTTGGGTATCATCATGAGGTCATGCATCATATTACATAATATGATTGTTGAGGATGAACGAGATTCATATTCTCAACGTTGGACCGATTTTGAGCAATCTGAGGAAAGTGGATCTAGTGCACCACAACCATACTCGACCGAGGTGTTACCCGCTTTTGCAAATCATGTGCGTGCTAGATCAGAGTTCCGTGATCCAAATGTTCATCAAGAATTGCAAGCTGATCTAGTGAAGCACATATGGACAAAGTTTGGAATGTTCCGTGATTGA 2016 0.4157 MDPNNHFNTQNSANFPFNQNPNNFQNPNNYQNPNYYQNPNQFSNQHPQNIPSFGFPPNFNQSSSVPNFQPYYGSMPRNPSQTPPFNGYVTMANANFPSGGVPEFPEFSTQLTIGGMIVSNEVAPNSEDSTPKSRKTQQPAWNTEQNLVLISGWIKFGTSSVVGRNQKGETYWGKIAEYCNEHCSFDPPRDGPACRNRFNYMNKVLGKWIGAYDGAKRMQGSGWSENDVLAKAQELYACGKNVRFTLMEEWHALRDQPRYVSQVGGNIGSGKRRNKISEDNAPRSRKYLNRDHAAANQRLIDDYFANEPTYGDAMFRRRYRMKKNVFLRIVGDLSSSDNYFTQRVDAANKEGISPLAKCTTAMRMLAYGVAADAVDEYIKIGGTTALECLRRFCKGIIRLYEQVYLRAPTQDDLQRILHVSEMRGFPGMIGSIDCMHWEWKNCPKAWEGQFTRGDKGTTTVILEAVASHDLWIWHAFFGCPGTLNDINVLDRSPVFDDVEQGKAPSVNFFVNQRPYNMAYYLADGIYPSYPTFVKSIRLPQSEPDKLFAKFQEGCRKDIERAFGVLQARFKIIREPARLWDIADLGIIMRSCIILHNMIVEDERDSYSQRWTDFEQSEESGSSAPQPYSTEVLPAFANHVRARSEFRDPNVHQELQADLVKHIWTKFGMFRD 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05557 671 MobiDBLite consensus disorder prediction 122 141 - -
Vivi4g05557 671 MobiDBLite consensus disorder prediction 1 29 - -
Vivi4g05557 671 PANTHER OS12G0169200 PROTEIN 274 612 - -
Vivi4g05557 671 MobiDBLite consensus disorder prediction 121 141 - -
Vivi4g05557 671 MobiDBLite consensus disorder prediction 263 283 - -
Vivi4g05557 671 Pfam Plant transposon protein 403 605 IPR006912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05557 Vivi-Chr4 190835630 190838538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05557 85 272 Glutathione S-transferase Gene Family AT5G41240 29.082 2.09e-13 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05557 - - vvo:131594136 1353.19