Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05514 ATGCCATTTGTATCCTTAATCTCATCGACCTATGTCTTCTTCTGTCTCTCCCAAACAAAAACACATCTCTTCATATTTATATATACTTCAACATTAACATGTTCAACAAAAAAACCAATGGCATTGGTGATGATGCTTCCTCAAACAAATGATTCACAAGATACAACAATTATCAAACTCGAATCAGCATATTCTGATTTAGAATCACTTCTTCAATCCTCAAAACAAATGGAACAAAACATCGAAACAATGGAAACAAGGTTTGATCTTTTACAAGGATCAATCACAACAGCCTCAAGAAGAATCAACCCTTTACAATCTTTGTCCATGTCAAGAAAAGCACTTGACACAAGAATCAACAGAGCTATTTCACCAGCTCTTGCTCTTCTCGAAACATTCAAGCTCACGGAATCGCTTCAAAACAATCTCCTTAACCTCTCTTCAAAGCTATCATCAGAAAACTCACATCAGAAGAGGCTTGAGAAGCTTTTAGATTACATGGATTGTGTTGATCAGTTGAATTTAGCTATAAACTCTATATGTGAAGTTGTTGAGCCGGTTATTATGAGGCTTCAAGAAGTGGTTGAGTTTATAAGTAGAACAAAAGCTGCTGATCAATATAGAACACAGAGGTTGAGAGAAGCACTTATTACTCTTAAAGCACTTTATGAAACTGAGGTTGATGAAATGAGATTTGAAGGGTTGTTGGATCAGGCTTTGCTTCATATGCAAGATGAGTTTGAGGCTCTTTTGCTTAAGTTAAAGCATAGGAAGTTGGGTGATTTTTCACTCATGCAACATGTTGGTGATGAGAGTGATGATGATTTCAAGGGTAGCTTTGAGCTTGGATCTGAGCTGGAAATTGAAGTTTTGAGAAGAATTTCAAACATTCTTGCTGCTAATGATTGCTTGGATATTTGCATTGACATCTATGTTAAGGTAAGATATAAAAGGGCTGCAAAAGCATTGATGAAGTTAAACCCTGAATACCTAAAAACATACACCCCAGAAGGAATTGATGAAATGGAATGGGAAAACTTGGAAACATCAATAACTCTTTGGACACAACACTTTGAAGTTGCAACAAAGAAAGTCCTTTTATCAGAAAAGAAACTTTGCGAAAGCGTTCTAGGCGAAATCATCGACGGACTAATCCATCCAGAATGTTTTGTGAAAATATCAGACAAGATCATGGCCGTGTTCTTTCGATTTGGAGAAGGTGTGGCGCGAAGCAACAAAGAGCCACAAAAACTGTTCAAACTACTAGACATGTTTGAGTCATTGGAGAAACTCAAACCACATGTACTTGAAATATTTGATGGAGAATCCGGTGAGGATATCTGCGCGCGGTTTCGCGAGCTCGAGAAGCTAATCATCGATGCATCAAGCAAAGTTTTTTGGGAATTCGGGTTACAAATAGAAGGAAACGTCGATGGTTTTCTTCCGCCTCCACAAGACGGTTCCGTTCCAAAAATAGTAAGATATGCTGTTAACTATCTTAAGTACTTATCCACAGAGAACTACAGAACAACAATGGCTAAGATTTTAAGAACCGAACAAACATGGAAAACCGAGTTGATGTTATCATCGAATCACGAAACAGATGAAGATTTATTGAAGTATGCTATTGGCAATGTAATGGAAGCACTTCAAAGAAACATAGAATCCAAACGTTTGAGTTCGAAAGACAAGATTTTGATGAATATTTTCATGATGAACACATATTGGTACATGTATATGAGAACAAAGAACACAGAACTTGGTGATTTGTTGGGAGAGAAATATATAAAAGAAAATTACAAAGCAGTGGCAGAAGAATCAGCTTACTTGTATCAGAAGCAAGCTTGGTTGGTTTTGGTGAAGATTTTGGATCATGATATTGATTTGAAGGAGCAACAACAAGGGAAGGAAAAGAGAATTGGAAGGTTGGTGAATGAAAAGATTGAGACATTTTTCAAGTGTTTGAGTGAGATTTATGAGAGGCATAGAAGTTTTTATAGTATACCTGATGTTGATTTGAGGGAACAAATGAGGGATGCAACAGTGAAACTTGTTGTGCCAATTTATGCTGAGTTTTTGGAGTCTTATTCAGGATTTTTGCAAAGGAAAGCTTATCCTAGTCCTCAAAGGATGCAAGGATTGCTTGGAAAGGCTTTTGGTTCGAATAATGATTGGAATTTGAATGGTGGTCGTAACTCTGGTTCGTTGGAAACTGATATCAGACGGTCTAGATGA 2235 0.3705 MPFVSLISSTYVFFCLSQTKTHLFIFIYTSTLTCSTKKPMALVMMLPQTNDSQDTTIIKLESAYSDLESLLQSSKQMEQNIETMETRFDLLQGSITTASRRINPLQSLSMSRKALDTRINRAISPALALLETFKLTESLQNNLLNLSSKLSSENSHQKRLEKLLDYMDCVDQLNLAINSICEVVEPVIMRLQEVVEFISRTKAADQYRTQRLREALITLKALYETEVDEMRFEGLLDQALLHMQDEFEALLLKLKHRKLGDFSLMQHVGDESDDDFKGSFELGSELEIEVLRRISNILAANDCLDICIDIYVKVRYKRAAKALMKLNPEYLKTYTPEGIDEMEWENLETSITLWTQHFEVATKKVLLSEKKLCESVLGEIIDGLIHPECFVKISDKIMAVFFRFGEGVARSNKEPQKLFKLLDMFESLEKLKPHVLEIFDGESGEDICARFRELEKLIIDASSKVFWEFGLQIEGNVDGFLPPPQDGSVPKIVRYAVNYLKYLSTENYRTTMAKILRTEQTWKTELMLSSNHETDEDLLKYAIGNVMEALQRNIESKRLSSKDKILMNIFMMNTYWYMYMRTKNTELGDLLGEKYIKENYKAVAEESAYLYQKQAWLVLVKILDHDIDLKEQQQGKEKRIGRLVNEKIETFFKCLSEIYERHRSFYSIPDVDLREQMRDATVKLVVPIYAEFLESYSGFLQRKAYPSPQRMQGLLGKAFGSNNDWNLNGGRNSGSLETDIRRSR 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05514 744 Coils Coil 60 87 - -
Vivi4g05514 744 Gene3D Exocyst complex component Exo70 187 725 - -
Vivi4g05514 744 Pfam Exo70 exocyst complex subunit 354 702 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vivi4g05514 744 PANTHER EXOCYST COMPLEX PROTEIN EXO70 177 699 IPR004140 GO:0000145|GO:0006887
Vivi4g05514 744 SUPERFAMILY Cullin repeat-like 210 703 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05514 Vivi-Chr4 190099027 190102048 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05514 54 707 EXO70 exocyst subunit family AT4G31540 28.144 1.17e-71 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05514 - - vvo:131594125 1449.11