Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05510 ATGAAGTATCGGGTGGCACTAGTAGATGGCACTGTTGTTGCAGAAACACCGGAAGGAGGAGTTGAATTCTATGTGAACGATGGTCACGTTCTTCCTAGATTGCCGAAAGTGATCATGACTATGACCAGGGGAGAGAAGGCTGAATTAATTTTTCAACCTCAATATGCCTTTGGGGAGACGGGGAGAGAAGCTGGCAGCGGATTCCATTCAATTCCCCCAGACTCAGTGCTGCATGTTAATATTGAATTGGTGTCCTTCAAGCCTGTCATAAATGTTACTGGTGACTCTATGGTGATTAAGAAAATTTTGAAAGAAGGGGAGGGCGCTTTCACTGCCAACGAGGGTGCAAATGTTACTGAAGCTGGAGAACAGAAGAATGATTTTAGCAGCTACGTGAAGTATCAGATGGTAGTTGAAAGGTCCATAGAAACTCAAAGTCACGAACTTCAAAATATTGCTCATAAGATCATCACTGAAGTCAGTTACACAGCTATGCTAGAAGATGGCACTGTATTCGAGAAAAGAGGAATTGATGAAACACAGCCCTTGAAATTCGTAACTGATGAGGAACAAGTGATTACCGGTCTAGACCGAGCAGTGGCAACAATGAAAAAGGGCGAGAAGGCCATAATTAGCATACATCCTGATTATGCATTTGGAAATGTGGAAGTTAGAGAAAATATGGTTATTGTGCCACCAGGCTCGAAAGTAATCTATGACATTGAAGTGATAGATTTTATTAAGGAGAAAGCACCGTGGGAGTTAAATAATACTGAGAAAATTGAGGTAGCCGGGAGGAAGAAAGATGAAGGAAATTTATTATTTAAAAGTGGCAAATATCAGCGAGCAGCGAAGAAGTATGATAAGGCTGCTGATTTTGTTAGTGAAGACGGATCCTTTAGTGATGATGAGCAAAAGTTAGCTAAGTCGTTGAGAGTTTCATGCTGGTTAAATGGTGCAGCTTGTTGCCTTAAACTGAATGACTTTGCTGGAGCAATCAAACTATGTACTCAGGTGCTTGATGTTGAATCTCACAATGTGAAAGCTTTGTATAGACGAGCGCAGGCATATATAGAGACGGGAGACTTTCTTTTAGCAGATGTAGACATCAAGAAAGCTCTTGAGGTGGATCCCCAAAACAGGGAGGTAAAGATGCTGAAAATGAAAGTGAAACAACTTCAAGCTGATAGTGACAAAAAAGACGCCAAACTGTATGAAAATATGTTTGCCCATAAAACCAAGAGATTGAAGGTTGATAAAGAAGAGGATGAAGTGGTGAAAACGGAAATGGACAATGTTGGGGACAGTGCAACTGCTTCTGATGGTGGTTTAATAATTGATTCTTGTTGA 1350 0.4096 MKYRVALVDGTVVAETPEGGVEFYVNDGHVLPRLPKVIMTMTRGEKAELIFQPQYAFGETGREAGSGFHSIPPDSVLHVNIELVSFKPVINVTGDSMVIKKILKEGEGAFTANEGANVTEAGEQKNDFSSYVKYQMVVERSIETQSHELQNIAHKIITEVSYTAMLEDGTVFEKRGIDETQPLKFVTDEEQVITGLDRAVATMKKGEKAIISIHPDYAFGNVEVRENMVIVPPGSKVIYDIEVIDFIKEKAPWELNNTEKIEVAGRKKDEGNLLFKSGKYQRAAKKYDKAADFVSEDGSFSDDEQKLAKSLRVSCWLNGAACCLKLNDFAGAIKLCTQVLDVESHNVKALYRRAQAYIETGDFLLADVDIKKALEVDPQNREVKMLKMKVKQLQADSDKKDAKLYENMFAHKTKRLKVDKEEDEVVKTEMDNVGDSATASDGGLIIDSC 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05510 449 PANTHER PEPTIDYLPROLYL ISOMERASE 9 88 - -
Vivi4g05510 449 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 155 247 IPR001179 GO:0003755
Vivi4g05510 449 Pfam Tetratricopeptide repeat 326 387 - -
Vivi4g05510 449 Gene3D Tetratricopeptide repeat domain 250 407 IPR011990 GO:0005515
Vivi4g05510 449 ProSiteProfiles TPR repeat profile. 347 380 IPR019734 GO:0005515
Vivi4g05510 449 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 2 84 IPR001179 GO:0003755
Vivi4g05510 449 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 159 244 IPR001179 GO:0003755
Vivi4g05510 449 SUPERFAMILY FKBP-like 95 264 - -
Vivi4g05510 449 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 1 87 IPR001179 GO:0003755
Vivi4g05510 449 SUPERFAMILY FKBP-like 2 88 - -
Vivi4g05510 449 Gene3D - 1 87 IPR046357 GO:0003755
Vivi4g05510 449 SUPERFAMILY TPR-like 262 411 IPR011990 GO:0005515
Vivi4g05510 449 SMART tpr_5 347 380 IPR019734 GO:0005515
Vivi4g05510 449 SMART tpr_5 264 297 IPR019734 GO:0005515
Vivi4g05510 449 SMART tpr_5 313 346 IPR019734 GO:0005515
Vivi4g05510 449 FunFam Peptidylprolyl isomerase 252 407 - -
Vivi4g05510 449 Gene3D - 89 249 IPR046357 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05510 Vivi-Chr4 189991297 190000175 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05510 1 410 Calmodulin-binding Proteins AT3G25230 47.445 2.86e-125 373