Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05487 ATGGTCACTCTCTCTGGAGCACACACCATTAGACGCGCTCATTGCTCAGCTTTCAGCAACAGATTATACAACTTCAGCAGCACTTCAAGCCAGGATCCAAGTTTACATCCCTCATATGCTGCATTATTGAAGAGGCAATGTCCACAAGGAAACACAAACCAAAACTTGGTGATACCAATGGACCCTTCTAGCCTTGGAACTGCAGATGTAGGGTACTATATTGATATCTTGGCACATAGAGGCTTATTCACATCTGATCAGGCTCTCTTAACTACGACTGGAACAGCCAGACAAGTTAATCAAAATGCTAGGAATCCTCTTTATTTCTCTTGCAGATGTCTTGATGTCCGGAAAACCTTATATCAGAGTGATCATATTCAGGGTTGGAATAACAAAAGGGTTATTTCTTCGGACAAAAGTGGTCGAATTATTTTGGTGTTGGATACTACTCCATCTTCTCACAGAAACAAGTGTTTGGTGATCGCAAAATTGCAGAAAAGTCGGGAAAAAGGCCGAAGAATCGATGATTTGGACAATGCTGAAGTTATCAGTGCTTGGAGATATTCGCCCGGCGCATGA 579 0.4231 MVTLSGAHTIRRAHCSAFSNRLYNFSSTSSQDPSLHPSYAALLKRQCPQGNTNQNLVIPMDPSSLGTADVGYYIDILAHRGLFTSDQALLTTTGTARQVNQNARNPLYFSCRCLDVRKTLYQSDHIQGWNNKRVISSDKSGRIILVLDTTPSSHRNKCLVIAKLQKSREKGRRIDDLDNAEVISAWRYSPGA 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05487 192 SUPERFAMILY Heme-dependent peroxidases 1 135 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vivi4g05487 192 Gene3D Peroxidase, domain 2 1 124 - -
Vivi4g05487 192 ProSiteProfiles Plant heme peroxidase family profile. 1 109 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi4g05487 192 FunFam Peroxidase 1 115 - -
Vivi4g05487 192 PANTHER PEROXIDASE 25-RELATED 1 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi4g05487 192 Pfam Peroxidase 1 104 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05487 Vivi-Chr4 189380802 189385925 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05487 1 101 Peroxidase AT1G05260 51.961 1.21e-25 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05487 K00430 - gmx:100779031 182.956