Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05471 ATGTCCCTCCCTTTTACAGATCGCAAGCGTCGCAACCCCAAACCACACCATCAAAATCCTGTCCCCGACACAAAACGCGATGACGTAGAAGGTGGTTTCGACGGCTCGTCTTTCACCGGCGCCGTATTCAACCTCTCAACCACTATCGTCGGTGCCGGCATTATGGCTCTTCCCGCCGCCGTGAAACAACTCGGTCTGATTCCTGGTTTGATCATGATTGTTCTCTGTGCTATGATAACAGAATCGTCCATTGTGATTCTCTTGAGATTCACGCATGCGTCGAAATCTTCGACGTATTCTGGTGTTGTTCGTGATGGGTATGGTGATGTTGGTCGTTTCTTTTTGTTGCTTTGTATCATCTTCAACAACATGGGAATGCTCGTCGTATACATGGTCATTATCGGTGATGTGTTCTCTGGAACATGGTCACAAGGAGTCCATTATTCAGGAGTTTTAGATGAATGGTTTGGTCAACGTTTTTGGTCAACACGTCCTATCTTATTGTTTCTCACAACAATTTTTGTTTTTATCCCTCTCGCATCCTTTAGACGTGTAGATTCACTGAGGTACACTTCAGCATTATCTGTGGGATTGGCTATAGTATTTGTGGTGATAACAGCAGGTCTTGCAATTGTAAAGTTTTTTTATGGAAGCATTGGTATGCCACGCTTAATGCCCAAACTCACAAATGATGAATCCTTTTGGAAGCTCTTCACTACCATCCCTATACTAGTCACTGCTTACATCTGCCATCATAACGTGCATCCTATAGAGAATGAACTCAAAGATACTTCTCATATGAATGCAATAGTTCGAACATCACTTATACTATGTACATGTGTGTACATGGCAACAAGTCTGTTTGGAATATTATTATTTGGAGACAAAATACAAGATGATGTACTTGCAAATTTTGATGGAGATCTTGGAGTTCCTTATGGTACATTTCTCAATGATGTAGTTAGAGTGAGCTATGGAATTCACCTTATCCTAGTATTCCCAATTGTGTTTTTCTCACTTAGACTTAATCTAGATGGTCTTTTGTTTCCACATGCAATTCCACTTGCCTTTGACAATAAGAGATTCTATTTTGTGACATTGATTCTCATGGCTTTTGTTTTTGTTGGAGCTAATTATGTTCCTAGTATTTGGTATGCTTTCCAATTCACAGGGGCTACAACTACACTTTTTGTTGGTTACATTTTTCCAGCTGCCATTGCTCTAAAGGACAATCGTGGGGTTGCAACAAAAAAAGATAAATTATTATCTTTGTTAATTATAATTTTGGCTGTCTCATGTAGCACTATAGCCATCTGTAGTGACTTGTATACCTTTAATAACAAAACAACATTACATGTAGCCTAA 1365 0.3971 MSLPFTDRKRRNPKPHHQNPVPDTKRDDVEGGFDGSSFTGAVFNLSTTIVGAGIMALPAAVKQLGLIPGLIMIVLCAMITESSIVILLRFTHASKSSTYSGVVRDGYGDVGRFFLLLCIIFNNMGMLVVYMVIIGDVFSGTWSQGVHYSGVLDEWFGQRFWSTRPILLFLTTIFVFIPLASFRRVDSLRYTSALSVGLAIVFVVITAGLAIVKFFYGSIGMPRLMPKLTNDESFWKLFTTIPILVTAYICHHNVHPIENELKDTSHMNAIVRTSLILCTCVYMATSLFGILLFGDKIQDDVLANFDGDLGVPYGTFLNDVVRVSYGIHLILVFPIVFFSLRLNLDGLLFPHAIPLAFDNKRFYFVTLILMAFVFVGANYVPSIWYAFQFTGATTTLFVGYIFPAAIALKDNRGVATKKDKLLSLLIIILAVSCSTIAICSDLYTFNNKTTLHVA 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05471 454 Pfam Transmembrane amino acid transporter protein 35 435 IPR013057 -
Vivi4g05471 454 PANTHER AMINO ACID TRANSPORTER 31 435 - -
Vivi4g05471 454 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05471 Vivi-Chr4 189132794 189136693 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05471 21 450 Amino Acid or Auxin Permease AAAP Family AT3G30390 54.060 8.10e-170 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05471 K14207 - gmx:100814034 672.544