Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05461 ATGGATCCCAATAATCATTTTAACACTCAAAATTCTGCTAATTTTCCATTTAACCAAAATCCCAACAATTTTCAAAATCCCAACAATTATCAAAATCCCAACTATTATCAAAATCCAAATCAATTTTCCAACCAACATCCTCAAAACATACCTAGTTTTGGTTTTCCACCAAATTTCAACCAGTCATCCTCTGTTCCAAACTTTCAACCATATTATGGATCTATGCCGAGAAATCCATCTCAAACACCCCCGTTTAATGGTTATGTGACAATGGCGAATGCAAATTTTCCAAGTGGTGGTGTACCTGAATTTCCCGAGTTTTCAACACAACTAACTATTGGTGGCATGATAGTTTCTAATGAAGTCGCTCCAAATTCAGAGGATTCAACTCCTAAGAGCAGGAAAACTCAGCAACCAGCATGGAACACTGAACAAAATTTGGTGCTAATTAGTGGGTGGATTAAATTTGGAACAAGCAGTGTTGTCGGGAGAAACCAGAAAGGTGAAACATATTGGGGTAAAATTGCTGAGTATTGTAATGAGCATTGCTCATTCGATCCTCCGCGTGATGGACCTGCATGCCGAAACCGTTTTAATTATATGAACAAAGTGTTGGGTAAATGGATTGGCGCTTATGATGGCGCTAAGCGTATGCAAGGAAGTGGTTGGTCGGAGAATGATGTTTTGGCAAAAGCGCAGGAATTATATGCATGTGGGAAGAATGTTAGATTCACTTTAATGGAAGAATGGCACGCTCTCCGTGATCAACCACGTTATGTTAGTCAAGTAGGAGGAAATATTGGCTCAGGAAGTAGTGGATCTAAGAGATCTCGCGAGAGTGATGCATGTGGCTCAAACACTGTAGAATCCAGTGCTCGTCCTATAGGAAGGGAGGCAGCTAAAAAAAAGGGTAAAAAGAAAAGCAAGGATAAAACCAAGAAAATGAAGATGTATCTAAAGCTAACTTCCGAAGAGCATCTAGATGACCGGAAGAACCAGCTGTTGAAAAAGTTGGAAGCCTACAATCAAAATCGTGAAATTGAAGAAAATTATATAGTCAATCGATTTAGAGAGTGTAGAAACAAAATATCGGAAGATAATGCACCTCGTAGTAGAAAATATCTCAATAGAGATCATGCAGCGGCAAACCAAAGACTAATTGATGACTACTTTGCCAATGAGCCTACATATGGCGATGCAATGTTTCGTCGTCGGTACCGGATGAAAAAAAATGTTTTCCTTCGAATCGTTGGGGACCTTTCAAGTAGTGATAACTACTTCACCCAGCGAGTTGATGCAGCTAATAAAGAAGGTATATCACCCTTAGCAAAATGTACCACAGCAATGCGAATGTTAGCATATGGTGTTGCAGCAGATGCGGTCGATGAGTACATCAAAATAGGAGGTACTACAGCATTGGAGTTGTATCTGAGAGCACCAACCCAAGATGACCTGCAAAGAATACTGCATGTTAGTGAAATGCGGGGGTTCCCAGGGATGATTGGGAGTATTGACTGCATGCACTGGGAGTGGAAAAATTGTCCTAAAGCATGGGAAGGACAGTTTACTAGAGGGGATAAGGGAACCACCACAGTTATTCTTGAAGCAGTTGGAAAGGCTCCAAGTGTGAATTTCTTTGTGAATCAACGTCCATATAATATGGCATACTATCTAGCTGATGGTATCTACCCTTCTTATCCAACTTTCGTCAAATCGATTAGACTTCCTCAAAGTGAACCCGATAAATTATTTGCAAAATTTCAGGAGGGATGTCGGAAGGACATCGAACGTGCATTTGGAGTGCTCCAAGCTCGATTTAAAATCATCCGTGAACCAGCTCGCTTGTGGGACATAGCTGATTTGGGTATCATCATGAGGTCATGCATCATATTACATAATATGATTGTTGAGGATGAACGAGATTCATATTCTCAACGTTGGACCGATTTTGAGCAATCTGAGGAAAGTGGATCTAGTGCACCACAACCATACTCGACCGAGGTGTTACCCGCTTTTGCAAATCATGTGCGTGCTAGATCAGAGTTCCGTGATCCAAATGTTCATCAAGAATTGCAAGCTGATCTAGTGAAGCACATATGGACAAAGTTTGGAATGTTCCGTGATTGA 2127 0.4081 MDPNNHFNTQNSANFPFNQNPNNFQNPNNYQNPNYYQNPNQFSNQHPQNIPSFGFPPNFNQSSSVPNFQPYYGSMPRNPSQTPPFNGYVTMANANFPSGGVPEFPEFSTQLTIGGMIVSNEVAPNSEDSTPKSRKTQQPAWNTEQNLVLISGWIKFGTSSVVGRNQKGETYWGKIAEYCNEHCSFDPPRDGPACRNRFNYMNKVLGKWIGAYDGAKRMQGSGWSENDVLAKAQELYACGKNVRFTLMEEWHALRDQPRYVSQVGGNIGSGSSGSKRSRESDACGSNTVESSARPIGREAAKKKGKKKSKDKTKKMKMYLKLTSEEHLDDRKNQLLKKLEAYNQNREIEENYIVNRFRECRNKISEDNAPRSRKYLNRDHAAANQRLIDDYFANEPTYGDAMFRRRYRMKKNVFLRIVGDLSSSDNYFTQRVDAANKEGISPLAKCTTAMRMLAYGVAADAVDEYIKIGGTTALELYLRAPTQDDLQRILHVSEMRGFPGMIGSIDCMHWEWKNCPKAWEGQFTRGDKGTTTVILEAVGKAPSVNFFVNQRPYNMAYYLADGIYPSYPTFVKSIRLPQSEPDKLFAKFQEGCRKDIERAFGVLQARFKIIREPARLWDIADLGIIMRSCIILHNMIVEDERDSYSQRWTDFEQSEESGSSAPQPYSTEVLPAFANHVRARSEFRDPNVHQELQADLVKHIWTKFGMFRD 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05461 708 MobiDBLite consensus disorder prediction 122 141 - -
Vivi4g05461 708 MobiDBLite consensus disorder prediction 299 314 - -
Vivi4g05461 708 MobiDBLite consensus disorder prediction 262 292 - -
Vivi4g05461 708 PANTHER OS12G0169200 PROTEIN 340 649 - -
Vivi4g05461 708 MobiDBLite consensus disorder prediction 261 314 - -
Vivi4g05461 708 MobiDBLite consensus disorder prediction 1 29 - -
Vivi4g05461 708 Pfam Plant transposon protein 538 642 IPR006912 -
Vivi4g05461 708 MobiDBLite consensus disorder prediction 121 141 - -
Vivi4g05461 708 Coils Coil 324 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05461 Vivi-Chr4 189011846 189015016 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g05461 85 306 Glutathione S-transferase Gene Family AT5G41240 28.631 2.65e-16 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05461 - - vvo:131633225 1320.84